1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...attgcattcatcttgtatcctgcgtatttaatgtatctgagttgttgcttggttgatcattctgtaaccgtaaaacatatctaatggaatatttgtgcagGTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCTGTGAGCAAAATTTTTATATCAG
species | Oryza sativa |
transcript | LOC_Os03g36790.3 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCTAAGGATTATATACATGGCAGTTAATGGTGTTATATATGTAATCCAG GTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCTEST: gi|27547069|gb|CA765194.2|CA765194
genomic: AGCTAAGGATTATATACATGGCAGTTAATGGTGTTATATATGTAATCCAGgttggtgctt ... atttgtgcagGTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCT
EST: GGTGTTATATATGTAATCCAG GTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCT
genomic: GGTGTTATATATGTAATCCAGgttggtgctt ... atttgtgcagGTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCT
tgcttggttgatcattctgtaaccgtaaaacatatctaatggaatatttgtgcagGTTTGTATTTGGATATACCTTGGGACAAATGATAGTCCTCTGCTAGAGCCTGTGAGCAAAATTTTTATATCAG
atctaat putative branch site (score: 32)
taaaacatatctaat TA-rich tract