1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaatttcatttccaaggtctcttactgattgatgtatattggtccactgttgagcagctgctatatttactgtctttgattgcaatctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATTTGAAAGAGCTAGTTTCAAAGTTCATTCCTGAAGTTATTGGGAAGGAAA
species | Oryza sativa |
transcript | LOC_Os03g10340.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGGAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86523708|gb|CI163914.1|CI163914
genomic: TAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33664975|gb|CF295942.1|CF295942
genomic: AAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTEST: gi|702558|gb|D48849.1|D48849
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCT
EST: CTAACCAGGTGANGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGTTT-AAGCTGTGAEST: gi|87020240|gb|CI261104.1|CI261104
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATT-CGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGA
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|38481755|gb|CF965830.1|CF965830
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TAACCAGGTGAAGAGGACTTGCTATGCTCAACGCGAGTCACATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88960672|gb|CI382353.1|CI382353
genomic: TAACCAGGTGAAGAGGACTTGCTATGCTCAA-GCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCAT-GCCAACCAGGCTTCAAGCTGTGATEST: gi|33687117|gb|CF315356.1|CF315356
genomic: AGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|89169892|gb|CI110251.1|CI110251
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGGTGAEST: gi|86522285|gb|CI162491.1|CI162491
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCT-GTGA
EST: GCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58672107|gb|CK060793.1|CK060793
genomic: GCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTEST: gi|33689659|gb|CF317898.1|CF317898
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|218488713|gb|FG953590.1|FG953590
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGEST: gi|86900549|gb|CI298384.1|CI298384
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88241588|gb|CI241437.1|CI241437
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33659524|gb|CF282137.1|CF282137
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGEST: gi|218499634|gb|FG959031.1|FG959031
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86829565|gb|CI286753.1|CI286753
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27576934|gb|CA999628.1|CA999628
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86419509|gb|CI054310.1|CI054310
genomic: TATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33811315|gb|CF331547.1|CF331547
genomic: AGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27578093|gb|CB000788.1|CB000788
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86854351|gb|CI254296.1|CI254296
genomic: TCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: ATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27577986|gb|CB000681.1|CB000681
genomic: ATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33693693|gb|CF321932.1|CF321932
genomic: TATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58681868|gb|CK070555.1|CK070555
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58677042|gb|CK065729.1|CK065729
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33683407|gb|CF311646.1|CF311646
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58612772|gb|CK040484.1|CK040484
genomic: AGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGEST: gi|38469895|gb|CF954026.1|CF954026
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33693694|gb|CF321933.1|CF321933
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|87008484|gb|CI314942.1|CI314942
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: GTGAAGAGGACTGGCTATGCTCAACCGAGTCAGATCAGACAG ATTCGTCGCCAAGATGGTTGAAATCATGGCCCAACCAGGCTTCAAGCTGTGEST: gi|33805842|gb|CF328800.1|CF328800
genomic: GTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCG-CAAGATGGTTGAAATCATGG-CCAACCAGGCTTCAAGCTGTG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGAEST: gi|58691942|gb|CK080629.1|CK080629
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGA
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88199248|gb|CI199098.1|CI199098
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33820637|gb|CF336131.1|CF336131
genomic: AGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATG-TCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33805844|gb|CF328801.1|CF328801
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88215341|gb|CI215190.1|CI215190
genomic: TAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27576218|gb|CA998912.1|CA998912
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33817188|gb|CF334429.1|CF334429
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATEST: gi|33659525|gb|CF282138.1|CF282138
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|7134746|gb|AU082651.1|AU082651
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27576939|gb|CA999633.1|CA999633
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88995551|gb|CI022874.1|CI022874
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88830459|gb|CI010659.1|CI010659
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33817189|gb|CF334430.1|CF334430
genomic: CCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: TAACCAGGTGAAGAGGACTTGCTATG-TCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|27554311|gb|CA998211.1|CA998211
genomic: TAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|15856851|gb|BI809663.1|BI809663
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|29627211|gb|CB632222.1|CB632222
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88246476|gb|CI246325.1|CI246325
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: GCGAGTCAGATCAGACAG ATTCGTCGCTAGATGGTTGAAATCATGTCCAACCAGGCTTCAAGCTGTGATEST: gi|44679482|gb|CR292916.1|CR292916
genomic: GCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCCAGATGGTTGAAATCATGGCCAACCAGGCTTCEST: gi|58680509|gb|CK069196.1|CK069196
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTC
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|15850788|gb|BI799064.1|BI799064
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGCGATTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88836441|gb|CI078338.1|CI078338
genomic: AGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: GCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|89184653|gb|CI007078.1|CI007078
genomic: GCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88836217|gb|CI371322.1|CI371322
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: AGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTTTGATEST: gi|88991366|gb|CI034701.1|CI034701
genomic: AGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58692773|gb|CK081460.1|CK081460
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTEST: gi|58675823|gb|CK064510.1|CK064510
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|89195929|gb|CI007348.1|CI007348
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|87033282|gb|CI187906.1|CI187906
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|218490503|gb|FG960676.1|FG960676
genomic: CAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58596560|gb|CK007088.1|CK007088
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88975218|gb|CI023469.1|CI023469
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86530853|gb|CI171059.1|CI171059
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33687118|gb|CF315357.1|CF315357
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|86874368|gb|CI316734.1|CI316734
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: GAGGACT-GCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|33689922|gb|CF318161.1|CF318161
genomic: GAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGEST: gi|29627212|gb|CB632223.1|CB632223
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|8858189|gb|AU095507.1|AU095507
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|58661504|gb|CK050184.1|CK050184
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGEST: gi|33808922|gb|CF330347.1|CF330347
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATG
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|163918509|gb|EG711439.1|EG711439
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|88901503|gb|CI008931.1|CI008931
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATEST: gi|87035333|gb|CI189955.1|CI189955
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
EST: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAG ATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
genomic: CTAACCAGGTGAAGAGGACTTGCTATGCTCAAGCGAGTCAGATCAGACAGgtaatttcat ... atctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGAT
tggtccactgttgagcagctgctatatttactgtctttgattgcaatctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATTTGAAAGAGCTAGTTTCAAAGTTCATTCCTGAAGTTATTGGGAAGGAAA
ctttgat putative branch site (score: 185)
tctgccc putative PPT
tatatttact TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatttcatttccaaggtctcttactgattgatgtatattggtccactgttgagcagctgctatatttactgtctttgattgcaatctgcccagATTCGTCGCAAGATGGTTGAAATCATGGCCAACCAGGCTTCAAGCTGTGATTTGAAAGAGCTAGTTTCAAAGTTCATTCCTGAAGTTATTGGGAAGGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA