1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaggtagttctttcttgagctgtacttctatttactgagccttctgtaatgtcttaattcggtgttcacttcttatactgtttgacatgccagttaccaccctctaatgtaatcctgatttgaactcttatgtagTACCGAGACTTCCTGATTTTTCTCTAGACGTTGCACAGATTGTCAAAGTGGTTGAACAGGAAAAGCCAAAATCCATATTTCTGACATCTCCGAACAACCC
species | Oryza sativa |
transcript | LOC_Os02g47940.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TACGATGTATGAGTTTGATGCGTCACTCAATGGTGCACTTGTGATCAAGG TACCGAGACTTCCTGATTTTTCTCTAGACGTTGCACAGATTGTCAAAGTGG
genomic: TACGATGTATGAGTTTGATGCGTCAGTCAATGGTGCACTTGTGATCAAGGgtaggtagtt ... tcttatgtagTACCGAGACTTCCTGATTTTTCTCTAGACGTTGCACAGATTGTCAAAGTGG
tttgacatgccagttaccaccctctaatgtaatcctgatttgaactcttatgtagTACCGAGACTTCCTGATTTTTCTCTAGACGTTGCACAGATTGTCAAAGTGGTTGAACAGGAAAAGCCAAAATCCATATTTCTGACATCTCCGAACAACCC
tcctgat putative branch site (score: 10)
ctcttat putative PPT
taatgtaat TA-rich tract