1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...ttctttttgttgattatagtgcagtctggaagttaaacaaatgcaagaataataacaatgctatctctaattaaaccatttattttataattccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGGAAGAAGGGCAAGGGTGCCTCAGCTTAGAGCAAGTCTTTCTTTGTTGCT
species | Oryza sativa |
transcript | LOC_Os02g28810.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88523600|gb|CI451442.1|CI451442
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|33810743|gb|CF331265.1|CF331265
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAATCTCCAGAGEST: gi|88374817|gb|CI520883.1|CI520883
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88508522|gb|CI436028.1|CI436028
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|87018755|gb|CI254463.1|CI254463
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCACTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88505299|gb|CI432805.1|CI432805
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88434782|gb|CI548979.1|CI548979
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88289150|gb|CI553126.1|CI553126
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88216913|gb|CI216515.1|CI216515
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86542963|gb|CI183169.1|CI183169
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|8335431|gb|BE040383.1|BE040383
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAGGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88840629|gb|CI080083.1|CI080083
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|87035083|gb|CI189707.1|CI189707
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88262207|gb|CI365783.1|CI365783
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88216812|gb|CI216414.1|CI216414
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88240537|gb|CI239699.1|CI239699
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88375056|gb|CI523321.1|CI523321
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|87033802|gb|CI188426.1|CI188426
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88962721|gb|CI023821.1|CI023821
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86532662|gb|CI172868.1|CI172868
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88518089|gb|CI445743.1|CI445743
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88557821|gb|CI488258.1|CI488258
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86843433|gb|CI341485.1|CI341485
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88212727|gb|CI212367.1|CI212367
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86834175|gb|CI340686.1|CI340686
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86822080|gb|CI357772.1|CI357772
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86546129|gb|CI186335.1|CI186335
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86592532|gb|CI253213.1|CI253213
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88209477|gb|CI209326.1|CI209326
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|163926600|gb|EG713616.1|EG713616
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATTCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCEST: gi|33684454|gb|CF312693.1|CF312693
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATAT-CCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTC
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88241517|gb|CI241366.1|CI241366
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATAGCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88471326|gb|CI408597.1|CI408597
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|58603387|gb|CK013915.1|CK013915
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAGGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|55441585|gb|CV734116.1|CV734116
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|218495081|gb|FG957501.1|FG957501
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAGGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88205557|gb|CI205406.1|CI205406
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88411681|gb|CI521404.1|CI521404
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88206140|gb|CI205989.1|CI205989
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|55411402|gb|CV723778.1|CV723778
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88216601|gb|CI214701.1|CI214701
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88506500|gb|CI434006.1|CI434006
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88238855|gb|CI236706.1|CI236706
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88473066|gb|CI410337.1|CI410337
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88320553|gb|CI525495.1|CI525495
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88204901|gb|CI202752.1|CI202752
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88446272|gb|CI563102.1|CI563102
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88974461|gb|CI022002.1|CI022002
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88518164|gb|CI445818.1|CI445818
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88270081|gb|CI381379.1|CI381379
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|218491441|gb|FG947040.1|FG947040
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAACAGATGG CTATATCCTTGAGGGCAAAGAGCTEST: gi|7332465|gb|AU085811.1|AU085811
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCT
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|33655298|gb|CF277912.1|CF277912
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86528688|gb|CI168894.1|CI168894
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88322923|gb|CI548017.1|CI548017
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88216865|gb|CI216467.1|CI216467
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88479272|gb|CI416543.1|CI416543
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: GGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|58689688|gb|CK078375.1|CK078375
genomic: GGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAGGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86523086|gb|CI163292.1|CI163292
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88489747|gb|CI427019.1|CI427019
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|88480304|gb|CI417575.1|CI417575
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGEST: gi|86528297|gb|CI168503.1|CI168503
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
EST: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGG CTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
genomic: TTGCTGGCCTGCATTTCTTCCCGCCCTGGGCAGTGTGGCCGAGCAGATGGgtaagattcc ... ttccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAG
agaataataacaatgctatctctaattaaaccatttattttataattccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGGAAGAAGGGCAAGGGTGCCTCAGCTTAGAGCAAGTCTTTCTTTGTTGCT
ttccttgc CT-rich tract
tatctctaattaaacc TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttctttttgttgattatagtgcagtctggaagttaaacaaatgcaagaataataacaatgctatctctaattaaaccatttattttataattccttgcagCTATATCCTTGAGGGCAAAGAGCTGGAATTCTACATGAAGAAGCTCCAGAGGAAGAAGGGCAAGGGTGCCTCAGCTTAGAGCAAGTCTTTCTTTGTTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - ttgttga
- - - - - - - - - -tgcagtc
- - - - - - - - - - - - - - - - -taaacaa
- - - - - - - - - - - - - - - - - - - - atgcaag
- - - - - - - - - - - - - - - - - - - - - - - - - aataaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaccat