1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtacgatgctgtgtgtttgctttgatcctacaattgagtgatgcaccacaaacaatcttctttcccccattttttctgttgcgcaagaatacagtacttttactctaaatgacagcatcaaggggaactatgttttgtttctgaccaactttttccttttgatatttctgacactgttattgcttgataactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATTGTTGTACCAGAGTCCGATTTTCATCCACGCAGGTTATGGGGAAACCCAG
species | Oryza sativa |
transcript | LOC_Os01g73970.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAG ATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATTEST: gi|29641984|gb|CB646991.1|CB646991
genomic: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAGgtacgatgct ... aactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATT
EST: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAG ATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATTEST: gi|29663567|gb|CB659842.1|CB659842
genomic: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAGgtacgatgct ... aactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATT
EST: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAG ATTTATGTACCAACAAACCCCAGAGGAGCACAGAGCCTGGCACCTGGTATTEST: gi|29656275|gb|CB652550.1|CB652550
genomic: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAGgtacgatgct ... aactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATT
EST: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAG ATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATT
genomic: GGAATGCAAAGGGAAATGATACTGAATCAAGCTCAGACACTGCCATGAAGgtacgatgct ... aactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATT
accaactttttccttttgatatttctgacactgttattgcttgataactttctagATTTATGTACCAACAAACCCCAGAGGAGCAGAGAGCCTGGCACCTGGTATTGTTGTACCAGAGTCCGATTTTCATCCACGCAGGTTATGGGGAAACCCAG
tgataac putative branch site (score: 31)
ctttct CT-rich tract
ttttgatattt TA-rich tract