1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtagcctacattttgcactaacactatggcactacatttgctgggctagggaactttgctgattaaaactaaatgttttctcgaaagCTTCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCC
species | Oryza sativa |
transcript | LOC_Os01g62810.4 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAG CTTCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAAC
genomic: TAAAATAATGGCAGTAGCTGCTGGTGGTCGTCATACATTAGCACTATCAGgtagcctaca ... ttctcgaaagCTTCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAAC
tacatttgctgggctagggaactttgctgattaaaactaaatgttttctcgaaagCTTCAGATTTAGGCCAAGTATGGGGTTGGGGCTATGGAGGAGAAGGGCAACTAGGCCTGGGTTCTAGAATCCGGACTGTTTCCTCTCCACATCCTATCCC
aactaaa putative branch site (score: 8)
tgttttctc CT-rich tract
attaaaactaaatgtt TA-rich tract