1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtttgtttcttaaccaaatactgttaaggttcagaagtatttcaattctcttctgattaatgcaagtgcccatctgactgatcattttggatttctttttgtgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATTCTGTTGGGGCTGTGAGCCTGTGATTGAGACATCTAAATTTAGTCGAAG
species | Oryza sativa |
transcript | LOC_Os01g58860.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGG GGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATEST: gi|86905383|gb|CI285346.1|CI285346
genomic: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGGgtttgtttct ... tgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
EST: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGG GGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATEST: gi|88469865|gb|CI407136.1|CI407136
genomic: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGGgtttgtttct ... tgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
EST: CACGCAGACATCATGAGCACAGG GGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATEST: gi|88245865|gb|CI245714.1|CI245714
genomic: CACGCAGACATCATGAGCACAGGgtttgtttct ... tgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
EST: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGG GGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATEST: gi|88983208|gb|CI020772.1|CI020772
genomic: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGGgtttgtttct ... tgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
EST: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGG GGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
genomic: TTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGGgtttgtttct ... tgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATAT
ttaatgcaagtgcccatctgactgatcattttggatttctttttgtgccttgcagGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTACTATATTCTGTTGGGGCTGTGAGCCTGTGATTGAGACATCTAAATTTAGTCGAAG
gactgat putative branch site (score: 4)
tttctttttgtgcctt putative PPT
atttcttttt TA-rich tract