1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtattagctcaagatcatacacttcatcactaatcattttcttcaaagcatacttcatgacactttttccttttacagAACTCATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGA
species | Oryza sativa |
transcript | LOC_Os01g56270.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCG AACTCATGTTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCC
genomic: GCACATAGATATGTGCTCTTCAACTGTCCAGATGTCAACCCATACCTTCGgtattagctc ... ccttttacagAACTCATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCC
tcatcactaatcattttcttcaaagcatacttcatgacactttttccttttacagAACTCATGCTGATGAGATTAGAAGAACATATCGGCAAGGCCGCATCACCCCAAAGATTATCGAGCGTATCCAAAATGAAAAATTCCATGAATGGTTCAGA
cactaat putative branch site (score: 6)
cactttttccttttac putative PPT
taatcatttt TA-rich tract