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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgttcctgctctcaagaatatatatggtcatatggtttcctcatctgttacctttgaccaattgtaacaaacagtaaaattatctcactaagataacttcttcagatcctttgctacttttggcttattcttgtattaggtaattcacaaaactgattatactatttattggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA

Basic information

species Oryza sativa
transcript LOC_Os01g55540.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G094712_T02 (Zea mays), 3'ss of exon 4
gtgcgttcctgctctcaagaatatatatggtcatatggtttcctcatctgttacctttgacca-attgtaacaaacagtaaaattatctcactaagataacttct--------tcagatcctttgctact---tttggcttattc---ttgtattaggtaattcacaaaactgattatactatttattggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA
  |  |||    | | |    | ||     |    |  |||     ||   |     | |      |||    ||| || || |  |     | |  |  | |          | || ||| | ||||||   | ||| ||||||   || |||||  | ||| |   | |||||| |  | || | | ||| || ||||| ||||| ||||||||||| ||||| || |||||| | || || |||||||||||||| || ||||||||||||||||||||||| ||||| || 
--gtattctctgtttgactggtttacccattttcctcatttgtgggtcaactgttcctaatggtgatgttgtcaactgtgaattcttagtgttgaagtttcattacataaaaataagttccctagctactggttctggtttattcaggttttattacttcatt-agggagctgattttttttttgaatcgaatagCCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG

upper sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA06G08670.2 (Glycine max), 3'ss of exon 4
gtgcgttcctgctctcaagaatatatatggtcatatggtttcctcatctgttacctttgaccaattgtaacaaacagtaaaattatctcactaagataacttcttcagatcctttgctacttttggcttattcttgtattaggtaattcacaaaactgattatactatttattggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA
                                                                                       | | ||| | ||          |  |||  |  || |      || |  || |  |||  | |         || ||| |||| |||  | || ||||| |||||||| || |||||  | || ||||| |||||||| ||||||||||||||||| || || ||||||||| | || |  || |||||  ||
--------------------------------------------------------------------------------------gttaataatagaaacaaaatcagtggtttcttgtttgtaaagatttttcctaatcagtacctaattgtttatgttttac-attttttgtcatagCCCTGCTATTCAAGACAACAGGGTTACCACTGTTCAATGCTTGTCTGGAACTGGTTCTTTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAA

upper sequence: LOC_Os01g55540.2 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA04G08560.1 (Glycine max), 3'ss of exon 4
gtgcgttcctgctctcaagaatatatatggtcatatggtttcctcatctgttacctttgaccaattgtaacaaacagtaaaattatctcactaagataacttcttcagatcctttgctacttttggcttattcttgtattaggtaattcacaaaactgattatactatttattggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA
                                                              |||  ||| ||||| || || |   |   |        ||  | |     ||||||  |     | || | || | |        | |||        | |  | ||| |||  | || ||||| |||||||| || |||||  | || ||||| |||||||| ||||||||||| ||||| || || ||||||||| | || |  || |||||  ||
-----------------------------------------------------------gttaataataa-aaacaatataagtgctttcttg-------tttgtaaagatttttgctgatcagtacctaattttttgt------gcttaca--------tttttttttttttgttatagCCCTGCTATTCAAGACAACAGGGTTACCACTGTTCAATGCTTGTCTGGAACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|163928483|gb|EG711368.1|EG711368
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88443684|gb|CI591909.1|CI591909
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88727471|gb|CI751126.1|CI751126
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTG
EST: gi|88393311|gb|CI618199.1|CI618199
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88456042|gb|CI567758.1|CI567758
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88719267|gb|CI742777.1|CI742777
EST:     CTGGCCGATTTCAATAAGCTGAGTGGTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGG
EST: gi|88420940|gb|CI620258.1|CI620258
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58669037|gb|CK057723.1|CK057723
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|29660055|gb|CB656330.1|CB656330
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88732533|gb|CI755710.1|CI755710
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88351233|gb|CI623455.1|CI623455
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAGGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTT
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTT
EST: gi|88362731|gb|CI608880.1|CI608880
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTAAGGAA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAA
EST: gi|58606260|gb|CK034293.1|CK034293
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88359643|gb|CI622333.1|CI622333
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88399381|gb|CI606002.1|CI606002
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88315748|gb|CI617221.1|CI617221
EST:     TGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: -GGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTT-GGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88316608|gb|CI622854.1|CI622854
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAA
EST: gi|88420185|gb|CI621454.1|CI621454
EST:     CTGGCCGATTTCAATAAGCTGAGTGGTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|29679665|gb|CB675940.1|CB675940
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88392766|gb|CI623997.1|CI623997
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33678230|gb|CF306469.1|CF306469
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33795088|gb|CF323417.1|CF323417
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58694708|gb|CK083395.1|CK083395
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|32948296|gb|BP184868.1|BP184868
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|44667509|gb|CR280943.1|CR280943
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58656014|gb|CK044694.1|CK044694
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58597339|gb|CK007867.1|CK007867
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|29639571|gb|CB644580.1|CB644580
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58679081|gb|CK067768.1|CK067768
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88396724|gb|CI620057.1|CI620057
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88393104|gb|CI616588.1|CI616588
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88358129|gb|CI605054.1|CI605054
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33795132|gb|CF323439.1|CF323439
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88364245|gb|CI612194.1|CI612194
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88402208|gb|CI615051.1|CI615051
EST:     CTGGGCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATT-AAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88415096|gb|CI583919.1|CI583919
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGC
EST: gi|88423171|gb|CI613472.1|CI613472
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|27576897|gb|CA999591.1|CA999591
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|2310287|gb|C26442.1|C26442
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|218490932|gb|FG946901.1|FG946901
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58689993|gb|CK078680.1|CK078680
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGG
EST: gi|218483959|gb|FG947666.1|FG947666
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|218486707|gb|FG945773.1|FG945773
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88730553|gb|CI754166.1|CI754166
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTG
EST: gi|33793733|gb|CF322749.1|CF322749
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33794958|gb|CF323359.1|CF323359
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|218494538|gb|FG968928.1|FG968928
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88730774|gb|CI754387.1|CI754387
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGA
EST: gi|32948428|gb|BP185000.1|BP185000
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88725854|gb|CI747366.1|CI747366
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTAC
EST: gi|88304127|gb|CI599815.1|CI599815
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TACTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88400351|gb|CI593426.1|CI593426
EST:     GGCCGATTTCAATAAGCTTGAGTGCTAAGCTTATTTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: GGCCGATTTCAATAAGCT-GAGTGCTAAGCTTATTTTT-GGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|29658837|gb|CB655112.1|CB655112
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33793380|gb|CF322571.1|CF322571
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88362433|gb|CI623773.1|CI623773
EST:     TGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGT
genomic: TGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTT-GGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGT
EST: gi|163926589|gb|EG713605.1|EG713605
EST:     TTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: TTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88719284|gb|CI742794.1|CI742794
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|2310086|gb|C26241.1|C26241
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33678676|gb|CF306915.1|CF306915
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88365128|gb|CI616547.1|CI616547
EST:     CTGGCCGATTTAAATAAGCTGAGTGCTAACCTTATTTTTGGTGCTGAAAG                         TCCTGCCATTCAACAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88316321|gb|CI621560.1|CI621560
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGATGACAG                         TCCTGCCCATTCAAGAGAATAGGGTGGCTAGAGTTCAGTGCTTGTCAGGAA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCC-ATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAA
EST: gi|58675206|gb|CK063893.1|CK063893
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|8527391|gb|AU092206.1|AU092206
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|86902328|gb|CI302359.1|CI302359
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCA
EST: gi|88362758|gb|CI608907.1|CI608907
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88352116|gb|CI613767.1|CI613767
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGAAAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|5004347|gb|AU069496.1|AU069496
EST:     TGGCCGATTTCAATAAATATGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: TGGCCGATTTCAATAAGC-TGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33677846|gb|CF306085.1|CF306085
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88350927|gb|CI620587.1|CI620587
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGG
EST: gi|32948311|gb|BP184883.1|BP184883
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88393658|gb|CI619950.1|CI619950
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTG
EST: gi|33796305|gb|CF324020.1|CF324020
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88362839|gb|CI614195.1|CI614195
EST:     CTGGCCGATTT-AATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTAAAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88729202|gb|CI752712.1|CI752712
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|58672429|gb|CK061115.1|CK061115
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|218478855|gb|FG949686.1|FG949686
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88730373|gb|CI753986.1|CI753986
EST:     TGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTTGACAG                         TCCTGCCATTCAAGAGAATAGGG
genomic: TGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCT-GACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGG
EST: gi|88721523|gb|CI744822.1|CI744822
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAG
EST: gi|88326122|gb|CI651177.1|CI651177
EST:     TGGCCGATTTCAATAAGCCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: TGGCCGATTTCAATAAGC-TGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|10794714|gb|AU108680.1|AU108680
EST:     CTGGCCGATTTCAATAAGCTGAGTNCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88719191|gb|CI742701.1|CI742701
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAG
EST: gi|88718527|gb|CI742037.1|CI742037
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAG
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAG
EST: gi|88362380|gb|CI619555.1|CI619555
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTAAAGTTCATTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33794428|gb|CF323098.1|CF323098
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|88416045|gb|CI594157.1|CI594157
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|33685641|gb|CF313880.1|CF313880
EST:     CTGGCCGATTTCAATAAGCTTAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAAC
EST: gi|10931116|gb|AU161390.1|AU161390
EST:     CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAG                         TCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCA
genomic: CTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 147

GTCACGTGTTAAGGAGTATTTGCCGATCACTGGACTGGCCGATTTCAATAAGCTGAGTGCTAAGCTTATTTTTGGTGCTGACAGgtgcgttcct ... attggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcttattcttgtattaggtaattcacaaaactgattatactatttattggaacagTCCTGCCATTCAAGAGAATAGGGTGGCTACAGTTCAGTGCTTGTCAGGAACTGGTTCTTTAAGGGTGGGAGGTGAATTTCTTGCAAGGCATTATCATGAA
                            aactgat  putative branch site (score: 147)
                          aaaactgattatacta  TA-rich tract