1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...ttgatcttcctaatttgagttcagttttacgaactcactcgataaggttaatttagtatgaggcgaattttttgatgtcaatttcacttctttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAGGGAGTGAAAGGGCACTATCATCGGTAAACAG
species | Oryza sativa |
transcript | LOC_Os01g53600.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCGGAGGACCTGGACAG TTGCCTCATCTTGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAEST: gi|29673186|gb|CB669461.1|CB669461
genomic: GCGGAGGACCTGGACAGgttttctctt ... tttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
EST: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAG TTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAEST: gi|29674619|gb|CB670894.1|CB670894
genomic: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAGgttttctctt ... tttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
EST: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAG TTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAEST: gi|66924914|gb|CX111762.1|CX111762
genomic: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAGgttttctctt ... tttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
EST: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAG TTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAEST: gi|29674660|gb|CB670935.1|CB670935
genomic: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAGgttttctctt ... tttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
EST: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAG TTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
genomic: GACAAAGATGGTGGTTATGGCGGAGGACCTGGACAGgttttctctt ... tttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATA
ggttaatttagtatgaggcgaattttttgatgtcaatttcacttctttgtgctagTTGCCTCATCTCGCTACAACTTATGCTGCTGTAAATACACTTGTAACTATAGGGAGTGAAAGGGCACTATCATCGGTAAACAG
ttttgat putative branch site (score: 13)
tttcacttctttgt putative PPT
aattttttgat TA-rich tract