1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgagatgatttgcattgattgattatgcttagttgaccaacaattttcttgccttgttgtgttgttgctaatctgctgcataaggctcatatgatctattggaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGATTGCATTCAACACTAACTACCGAGATACAGGATTGTTTGGCATCTGCACT
species | Oryza sativa |
transcript | LOC_Os01g51390.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCATATTGGGAACTTGGAATAGGAGCGTAGGGGTTGGGAACTGCTCAGG GTCTGCTTTAACTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCCTGATEST: gi|218481912|gb|FG956568.1|FG956568
genomic: AGCATATTGGGAACTTGGAATAGGAGCATTGGGGTTGGGAACTGCTCAGGgtgagatgat ... gaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGAT
EST: AGCATATTGGGAACTTGGAATAGGAGCGTTGGGGTTGGGAACTGCTCAGG GTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGATEST: gi|396941466|gb|HO188675.1|HO188675
genomic: AGCATATTGGGAACTTGGAATAGGAGCATTGGGGTTGGGAACTGCTCAGGgtgagatgat ... gaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGAT
EST: AGCATATTGGGAACTTGGAATAGGAGCGTTGGGGTTGGGAACTGCTCAGG GTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGATEST: gi|117220685|gb|CT852401.1|CT852401
genomic: AGCATATTGGGAACTTGGAATAGGAGCATTGGGGTTGGGAACTGCTCAGGgtgagatgat ... gaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGAT
EST: AGCATATTGGGAACTTGGAATAGGAGCGTTGGGGTTGGGAACTGCTCAGG GTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGAT
genomic: AGCATATTGGGAACTTGGAATAGGAGCATTGGGGTTGGGAACTGCTCAGGgtgagatgat ... gaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGAT
ttgtgttgttgctaatctgctgcataaggctcatatgatctattggaactgcaagGTCTGCTTTAGCTCGTGGTATCAGCAACGGTAATTTAGCTGAGAGCATGATTGCATTCAACACTAACTACCGAGATACAGGATTGTTTGGCATCTGCACT
tgctaat putative branch site (score: 19)
atatgat TA-rich tract