1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tgcactgtaacaatatagtttttatgtttgcatgtttggacccttaacaagaaatagaatattagaattgaagatccgggctcttatcatgtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGG
species | Oryza sativa |
transcript | LOC_Os01g34480.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86431768|gb|CI085379.1|CI085379
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: TGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTNGGCTGGATAAACGTTAAGGEST: gi|44671842|gb|CR285276.1|CR285276
genomic: TGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTCCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|29616459|gb|CB621471.1|CB621471
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86537762|gb|CI177968.1|CI177968
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|4715566|gb|AU056682.1|AU056682
genomic: GCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GAAGCAATTCTAAAGCTAATCAATG GATCATCCTCGACATANCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86604170|gb|CI114944.1|CI114944
genomic: GAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|87009973|gb|CI277474.1|CI277474
genomic: GAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89192986|gb|CI050284.1|CI050284
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: CAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89176203|gb|CI043224.1|CI043224
genomic: CAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86593765|gb|CI266445.1|CI266445
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86853770|gb|CI250021.1|CI250021
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86259620|gb|CI065493.1|CI065493
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88907332|gb|CI090126.1|CI090126
genomic: GAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: CTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|33808886|gb|CF330328.1|CF330328
genomic: CTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGTTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88828470|gb|CI073340.1|CI073340
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|33658080|gb|CF280694.1|CF280694
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86595224|gb|CI262462.1|CI262462
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86541265|gb|CI181471.1|CI181471
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTTACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCGATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88247035|gb|CI246884.1|CI246884
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: TCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|87031437|gb|CI261811.1|CI261811
genomic: TCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|218497240|gb|FG957726.1|FG957726
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89188281|gb|CI115530.1|CI115530
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCGATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86855526|gb|CI267055.1|CI267055
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|117221000|gb|CT845506.1|CT845506
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCA-TG GATCATCCTCGACATATEST: gi|88828612|gb|CI073482.1|CI073482
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATAT
EST: ACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88222853|gb|CI220704.1|CI220704
genomic: ACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89179866|gb|CI044145.1|CI044145
genomic: AGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88840356|gb|CI079810.1|CI079810
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89181441|gb|CI112947.1|CI112947
genomic: AAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACATTAAGGEST: gi|88243689|gb|CI242811.1|CI242811
genomic: GCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88218768|gb|CI218617.1|CI218617
genomic: GCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86424481|gb|CI063242.1|CI063242
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89174836|gb|CI111034.1|CI111034
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86510036|gb|CI152669.1|CI152669
genomic: AGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86536058|gb|CI176264.1|CI176264
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|87024806|gb|CI261315.1|CI261315
genomic: GCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88246948|gb|CI246797.1|CI246797
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: CTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|87020737|gb|CI267458.1|CI267458
genomic: CTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|87019002|gb|CI256887.1|CI256887
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88833896|gb|CI077377.1|CI077377
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: TTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86427914|gb|CI073011.1|CI073011
genomic: TTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|11564616|gb|AU165252.1|AU165252
genomic: GAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AAGCCTTCACTTGAATACTAGTGNTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGEST: gi|87029301|gb|CI250234.1|CI250234
genomic: -AGCCTTCAC-TGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTC-GACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAG
EST: GCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88248464|gb|CI248313.1|CI248313
genomic: GCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86593746|gb|CI266426.1|CI266426
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCTATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88908183|gb|CI090778.1|CI090778
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: TGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTGAAGGEST: gi|88958573|gb|CI096089.1|CI096089
genomic: TGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|2312785|gb|C28940.1|C28940
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGGCTGGGATAAACGGTAAEST: gi|86412780|gb|CI067185.1|CI067185
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGG-CTGG-ATAAACGTTAA
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|89173370|gb|CI041263.1|CI041263
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|5002866|gb|AU067975.1|AU067975
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: CAGCCTTCACTGAATNCTAGTGCTGAAGCAATTCTGAAGCTAATCCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAANCGTTAAGEST: gi|86545360|gb|CI185566.1|CI185566
genomic: CAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAAT-CAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAG
EST: AGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86428683|gb|CI075364.1|CI075364
genomic: AGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: TTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86602007|gb|CI260477.1|CI260477
genomic: TTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86594228|gb|CI251100.1|CI251100
genomic: AATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: ACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86602088|gb|CI260558.1|CI260558
genomic: ACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|86593825|gb|CI266505.1|CI266505
genomic: AGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGEST: gi|88218615|gb|CI218464.1|CI218464
genomic: GCAGCCTTCACTGAATACTAGTGCTGAAGCAATTCTGAAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
EST: AAGCTAATCAATG GATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
genomic: AAGCTAATCAATGgtatggggtc ... gtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGG
aacaagaaatagaatattagaattgaagatccgggctcttatcatgtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGG
ccttaac putative branch site (score: 3)
aaatagaatattagaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgcactgtaacaatatagtttttatgtttgcatgtttggacccttaacaagaaatagaatattagaattgaagatccgggctcttatcatgtccatgcagGATCATCCTCGACATATCCTAATTTCAGCTTTGGCTGGATAAACGTTAAGGATGTTGCCCTGGCACATATCCTTGCATATGAAGTTCCTTCAGCAAATGG
tgcactg
- - - - aacaata
- - - - - - - - - - -ttatgtt
- - - - - - - - - - - - - - tgcatgt
- - - - - - - - - - - - - - - - - - tggaccc
- - - - - - - - - - - - - - - - - - - - - - - -caagaaa