1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...tccctaagttctattcatgaagttacacttgagactagttcaggtctttttgtatatttgttttatatcattaactaagtgttactcgttctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCATGAGAGAATCACATGCCAATATTACG
species | Oryza sativa |
transcript | LOC_Os01g28680.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ACGTTGGACAGTTTCAGATATTGCTCTTTTCAC-TGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATAEST: gi|33795075|gb|CF323413.1|CF323413
genomic: ACGTTGGACAGTTTCAGATATTGCTCTTT-CACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATA
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|29666638|gb|CB662913.1|CB662913
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGEST: gi|33674946|gb|CF303185.1|CF303185
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATG
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|29612829|gb|CB617842.1|CB617842
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|33676175|gb|CF304414.1|CF304414
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|29688485|gb|CB684760.1|CB684760
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|33675917|gb|CF304156.1|CF304156
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGEST: gi|33676806|gb|CF305045.1|CF305045
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATG
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCEST: gi|33693127|gb|CF321366.1|CF321366
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
EST: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTA GCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
genomic: TACGTTGGACAGTTTCAGATATTGCTCTTTCACCTGATCAACGATACCTAgtaagactct ... ctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGC
ctttttgtatatttgttttatatcattaactaagtgttactcgttctttttgcagGCTTATTCCAGTCTGTCACCTATCGTTCATATGGTAGATATCCAGAATGGCATGAGAGAATCACATGCCAATATTACG
cattaac putative branch site (score: 2)
ttactcgttcttttt putative PPT
tgtatatttgttttat TA-rich tract