1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtacctactcagaccattttataaattgtgattatgtcactacctaagtgatgattatgttttaacactgttctatgtgatatggggaaaaacagGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTGGCTCAACCGCGATCCTGATGCACCGACAGGGGGTGAGTTAATCTTTGGT
species | Oryza sativa |
transcript | LOC_Os01g18630.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: CTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTG GCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTGEST: gi|29670408|gb|CB666683.1|CB666683
genomic: CTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTGgtacctactc ... ggaaaaacagGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTG
EST: CTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTG GCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTG
genomic: CTTGGACTTGGATTTCCGGAGATCTCTGTGGGAGGAGCCCCTCCAATTTGgtacctactc ... ggaaaaacagGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTG
tacctaagtgatgattatgttttaacactgttctatgtgatatggggaaaaacagGCAGGGAATGAAAGAGCAGCAACTGATCGAGAAGGATGTATTCTCCTTCTGGCTCAACCGCGATCCTGATGCACCGACAGGGGGTGAGTTAATCTTTGGT
ttttaac putative branch site (score: 2)
atgattatgttttaa TA-rich tract