Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gaccattttatgctttacttatatgcttaggagaatgtttttaatttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA

Basic information

species Oryza sativa
transcript LOC_Os01g17170.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g17170.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GRMZM2G081462_T01 (Zea mays), 3'ss of exon 4
------------------------------------------------------------------------------------------------------gaccattttatgctttact-tatatgcttaggagaatgtttttaatttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA
                                                                                                       |   | |||   ||  |  |  | |||| ||||||  | | | ||||   | ||  ||||||    |    || |   ||| || | |    |   |||||||||||||||||| || ||||| ||||| ||||| || |||||||||||||| || |||||||||||| | ||||||||||| ||||||||| | ||||
gtataaatgagctgcattttgtcatttcatttccacctgtttgccatacatagttcatacttttctgaacaatgtcattacaaaaggttaggaattcacatgaaatttcttagagttcgccgtcgacgcttgggagaa--tctatgatttgcttcta--gaaatgttggcgtgaatta---aatatgcgtacccat---gcagACCAACCGCACAACGGCGAGGATCTTCCCTGCTGTCCTAGACGTCGAGAACCCAGAGTTCAAGAGGAAGCTTGACAGGATGGTTGAGATCAACCAGAAGA

upper sequence: LOC_Os01g17170.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA19G30350.1 (Glycine max), 3'ss of exon 4
--gaccattttatgctttacttatat-gcttaggagaatgtttttaatttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA
   | || | |||   | |   |  | | | |  | |       |||  |  ||||| |  ||  |    ||| |  |   | | | || ||| |||| |||||| ||||||||||| || ||||||||||| ||||||||||| || || ||||| || |||||| ||||||| ||| ||||||||||||| ||| | ||||
actatcagtctatcactaatagaagttgatcaacaaagaacaaataaactc-gtatattacaaccagt-tactca-aacgtagtttctggattgtttttgcagACAAACCGCACAACTGCTAGGATTTTCCCAGCTGTTCTTGATGTTGAAAACCCAGAGTTCAAGCGGAAGTTGGACCGGATGGTGGAGATAAACGAGAAGA

upper sequence: LOC_Os01g17170.1 (Oryza sativa), 3'ss of exon 4
lower sequence: GLYMA03G27380.1 (Glycine max), 3'ss of exon 4
gaccattttatgctttacttatatgcttaggagaatgtttttaatt--tttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA
    |   |||   | |   |   | | |  | |       | ||    | | ||| |  ||  |    ||| | | | |||| | || ||| |||| |||||| ||||||||||| ||  |||||||||| || |||||||| || || ||||| || |||||| ||||||| ||| ||||||||||||| ||  | ||| 
-tgaaaactatcactaataaagtcgatcaacaaacaacaaatgatgaactcggatattacaaccagt-tactcaagcttcaatttctggattatttttgcagACAAACCGCACAACTGCTCGGATTTTCCCAGCCGTTCTTGATGTTGAAAACCCAGAGTTCAAGCGGAAGTTGGACCGGATGGTGGAGATAAATGAGAAGC

upper sequence: LOC_Os01g17170.1 (Oryza sativa), 3'ss of exon 4
lower sequence: Vv08s0040g00390.t01 (Vitis vinifera), 3'ss of exon 4
gaccattttatgctttacttatatgcttaggagaatgtttttaatttttgtatactg-aaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA
             |   | |  ||  | | |       |     |||||  ||  |  || | |  |  |   | || |  | ||    ||| ||| |||||||||||||||||| || ||||| ||||| ||||| || || || |||||||| || |||||||||||||| ||||||||||||||||||||| |  || 
------------gtgagcctgcatattcatg----ccctccagctttttccatgttataagtaatgatccgagtcatgct-tatgaaattttgttttgcagACCAACCGCACAACTGCCAGGATCTTCCCTGCTGTGCTGGATGTTGAGAACCCAGAGTTCAAGAGGAAGTTGGACAGGATGGTGGAGATCAACCAGCAGC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86251702|gb|CI018894.1|CI018894
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86598213|gb|CI354830.1|CI354830
EST:     ACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCCCTGTTCTTGACGTCGAGAAC
genomic: ACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|300216174|gb|HO087959.1|HO087959
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86250756|gb|CI007619.1|CI007619
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86413687|gb|CI019272.1|CI019272
EST:     AGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88847903|gb|CI006089.1|CI006089
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88217005|gb|CI216709.1|CI216709
EST:     ATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: ATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29685252|gb|CB681527.1|CB681527
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88980710|gb|CI022418.1|CI022418
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|38475921|gb|CF960054.1|CF960054
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88985194|gb|CI006848.1|CI006848
EST:     TCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: TCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33814869|gb|CF333297.1|CF333297
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAA
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACC-GCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAA
EST: gi|86251497|gb|CI016786.1|CI016786
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88844761|gb|CI021336.1|CI021336
EST:     AAGGGATTGGTCGGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33675406|gb|CF303645.1|CF303645
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29662325|gb|CB658600.1|CB658600
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86851787|gb|CI316356.1|CI316356
EST:     ACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: ACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|87016760|gb|CI275762.1|CI275762
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88985209|gb|CI006863.1|CI006863
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88991629|gb|CI019807.1|CI019807
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86854029|gb|CI252020.1|CI252020
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86250745|gb|CI007608.1|CI007608
EST:     ACATGCATGTGATAATTGAG                         ACCAACCGCACGACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: ACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29676339|gb|CB672614.1|CB672614
EST:     AAGGGATTGGTCTGGACACCAAAGAATTTGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86511397|gb|CI154030.1|CI154030
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88975963|gb|CI024214.1|CI024214
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|66912779|gb|CX099627.1|CX099627
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88904204|gb|CI001937.1|CI001937
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|58604355|gb|CK014883.1|CK014883
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86252478|gb|CI003814.1|CI003814
EST:     GACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|38468417|gb|CF952548.1|CF952548
EST:     CACCAAAGAAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: CACCAAAG-AATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89172824|gb|CI022703.1|CI022703
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|58610998|gb|CK038710.1|CK038710
EST:     AATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86434139|gb|CI094482.1|CI094482
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTGGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86513521|gb|CI156154.1|CI156154
EST:     TGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: TGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88975207|gb|CI023458.1|CI023458
EST:     CATGCATGTGATAATTGAG                         ACCAACCGCACAACAGC-AGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: CATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88847889|gb|CI006075.1|CI006075
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86255000|gb|CI017120.1|CI017120
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33674878|gb|CF303117.1|CF303117
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29672479|gb|CB668754.1|CB668754
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88974994|gb|CI023245.1|CI023245
EST:     CATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: CATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88989947|gb|CI018824.1|CI018824
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89167736|gb|CI021435.1|CI021435
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86509722|gb|CI152355.1|CI152355
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTNGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86413684|gb|CI019269.1|CI019269
EST:     GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAG
genomic: GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89193832|gb|CI018150.1|CI018150
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86250850|gb|CI007713.1|CI007713
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88966000|gb|CI006758.1|CI006758
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89165016|gb|CI102104.1|CI102104
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33675647|gb|CF303886.1|CF303886
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29616676|gb|CB621688.1|CB621688
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88216160|gb|CI216009.1|CI216009
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|87017053|gb|CI286189.1|CI286189
EST:     GACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29619026|gb|CB624038.1|CB624038
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33675994|gb|CF304233.1|CF304233
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|6431642|gb|AU081294.1|AU081294
EST:     CATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACNTCGAGAAC
genomic: CATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|109713003|gb|CI105611.1|CI105611
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATGGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88202991|gb|CI202840.1|CI202840
EST:     GTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89168789|gb|CI020870.1|CI020870
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|38472141|gb|CF956272.1|CF956272
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86413616|gb|CI019201.1|CI019201
EST:     GTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86493917|gb|CI136550.1|CI136550
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88971410|gb|CI017724.1|CI017724
EST:     GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|13420468|gb|AU174558.1|AU174558
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|33814870|gb|CF333298.1|CF333298
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86483780|gb|CI126413.1|CI126413
EST:     ACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: ACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88975664|gb|CI021746.1|CI021746
EST:     GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: GGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86600141|gb|CI251511.1|CI251511
EST:     AAGGGATTGGTCTGGACACCAAAGTATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|38476396|gb|CF960529.1|CF960529
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCTAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89193936|gb|CI018254.1|CI018254
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88974904|gb|CI023173.1|CI023173
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|88847736|gb|CI018427.1|CI018427
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|89198658|gb|CI016743.1|CI016743
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|29615138|gb|CB620151.1|CB620151
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86596665|gb|CI286578.1|CI286578
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86250584|gb|CI003702.1|CI003702
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|157652453|gb|EX452087.1|EX452087
EST:     AGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|38481331|gb|CF965420.1|CF965420
EST:     AAGGGATGGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|2276010|gb|C24987.1|C24987
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTNCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|86250839|gb|CI007702.1|CI007702
EST:     AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAAC
EST: gi|157652025|gb|EX451659.1|EX451659
EST:     AAGGGATTGGTCTGGACA-CAAAGAATTCGACATGCATGTGATAATTGAG                         ACCAACCGCACAACAGCAAGGATTTTCCCCGNCTGTTCTTGACGTCGAGAA
genomic: AAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCG-CTGTTCTTGACGTCGAGAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 302

GTGTATGTGACCATGTACCTAAATGATTGCCAACGTACTACATTCTATGAAGGGATTGGTCTGGACACCAAAGAATTCGACATGCATGTGATAATTGAGgtaagaaaat ... tttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA
                     cactgat  putative branch site (score: 302)
                                         cattttttt  putative PPT
                                          attttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gaccattttatgctttacttatatgcttaggagaatgtttttaatttttgtatactgaaatgaccacactgatgatacaatctgtgcatttttttggcagACCAACCGCACAACAGCAAGGATTTTCCCCGCTGTTCTTGACGTCGAGAACCCTGAATTCAAGAGGAAGTTAGACAGGATGGTGGAGATCAACAAAAAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA
- - - - tatgctt
- - - - - - - - - - - - - - - - - - - - - - - - - - tactgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgatga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgcatt