Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtatgagttttaattaattatatgaaaattatgtacaatacaaatccatgtgattgttactaacaaacttcttctgtagAATGCAATACATGGATGCTAAGAAGAAAAAAGAACCCATCGGCTTCTTGGATCCAACTCGGATCTGCCAAAGACAGCATACC

Basic information

species Oryza sativa
transcript LOC_Os12g27400.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaattatgtacaatacaaatccatgtgattgttactaacaaacttcttctgtagAATGCAATACATGGATGCTAAGAAGAAAAAAGAACCCATCGGCTTCTTGGATCCAACTCGGATCTGCCAAAGACAGCATACC
                                 tactaac  putative branch site (score: 0)
                                           cttcttctgt  putative PPT
            aatacaaat  TA-rich tract