1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtacaatcattcaaccaatgttgctgccatgccatttaattaagctcgcaaccttggtcagagagattcagagtgaacttgacgacctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCGCAACGTCGCCGCCGGGCACAAGGC
species | Oryza sativa |
transcript | LOC_Os10g40030.4 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|88335213|gb|CI658220.1|CI658220
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|11025705|gb|AU162306.1|AU162306
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCNGTCGTCACAG GCGCGTCGA-CGGCATCGGGCTGGAGAAGACGCGCGTGTTGGCGEST: gi|88383988|gb|CI631878.1|CI631878
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|86885823|gb|CI295944.1|CI295944
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|11565212|gb|AU165848.1|AU165848
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAACGGGCATCGGGCTGGAGACGAAGCGCGTEST: gi|29656760|gb|CB653035.1|CB653035
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGG-CATCGGGCTGGAGACGACGCGCGT
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|58593021|gb|CF991329.1|CF991329
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGEST: gi|88402445|gb|CI596306.1|CI596306
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
EST: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAG GCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
genomic: GGAGGTCACCGCCGGCGTCGACGCCCGGGGCTTGGCCGCCGTCGTCACAGgtacaatcat ... ctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCG
aagctcgcaaccttggtcagagagattcagagtgaacttgacgacctggctgcagGCGCGTCGAGCGGCATCGGGCTGGAGACGACGCGCGTGTTGGCGCTGCGCGGCGTGCGCGTCGTCATGGCCGTGCGCAACGTCGCCGCCGGGCACAAGGC
acttgac putative branch site (score: 4)