1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtacggtatttcttaacttattttgttatataactttgatgatgttagagtcataacttcagatcattctgtaatttaaaatgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGTTGAGGGAAATGTTCCAAAATCCAGAATTTATTCGCCAGCTTACATCCC
species | Oryza sativa |
transcript | LOC_Os10g39620.6 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGEST: gi|33812321|gb|CF332050.1|CF332050
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGEST: gi|58676841|gb|CK065528.1|CK065528
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGEST: gi|58597929|gb|CK008457.1|CK008457
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAEST: gi|58681884|gb|CK070571.1|CK070571
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCA
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGEST: gi|29618971|gb|CB623983.1|CB623983
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
EST: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAG TTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
genomic: TGATGCAGATGATGCAGAATATCATGTCTGATCCACAGTCCATGAACCAGgtacggtatt ... atgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAG
ttgatgatgttagagtcataacttcagatcattctgtaatttaaaatgtccacagTTGCTTAACTTCAACCCAAATACACGCAACCTCATGGAATCAAACACTCAGTTGAGGGAAATGTTCCAAAATCCAGAATTTATTCGCCAGCTTACATCCC
tcataac putative branch site (score: 2)
attctgtaatttaaaa TA-rich tract