1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagcaccgaagaaatgacgcaacttcgttgcattgtcgctttgagttttgtgaggtgatgtggggtaactaacatctgcacttgggttggttcttggcagCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGACCGGGATAACCGAGTATAGTGTTCTCGACATCTATGACTACATCGAAAA
species | Oryza sativa |
transcript | LOC_Os08g43400.3 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACT CAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGAEST: gi|29631858|gb|CB636867.1|CB636867
genomic: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACTgtaagcaccg ... ttcttggcagCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGA
EST: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACT CAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGAEST: gi|29656888|gb|CB653163.1|CB653163
genomic: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACTgtaagcaccg ... ttcttggcagCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGA
EST: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCGGATGTCAGTGGAATCAACT CAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGA
genomic: CGAGGAAGGAGCGAAAGAAGTTGCTCTATCAGTTGTCAGTGGAATCAACTgtaagcaccg ... ttcttggcagCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGA
ttttgtgaggtgatgtggggtaactaacatctgcacttgggttggttcttggcagCAAGCATATTCGCGTATGGGCAAACAAGCAGTGGCAAGACTTACACGATGACCGGGATAACCGAGTATAGTGTTCTCGACATCTATGACTACATCGAAAA
aactaac putative branch site (score: 1)
ttctt putative PPT
taactaa TA-rich tract