1 5' 3' | 2 5' 3' | 3 5' 3' |
gtcagtacataatgctagatattctgatgtgaaaactttcaagatctgtattgtggtcttattagctgcaactgtaactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAAAGTAGAGCTCCTTTGTA
species | Oryza sativa |
transcript | LOC_Os08g33920.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88373025|gb|CI501019.1|CI501019
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: NTGAACCGTCCATATGNTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88667339|gb|CI715497.1|CI715497
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88909070|gb|CI718378.1|CI718378
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88293654|gb|CI505571.1|CI505571
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|13896492|gb|AU182828.1|AU182828
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTNTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|86421848|gb|CI059421.1|CI059421
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|89171624|gb|CI720683.1|CI720683
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|163928141|gb|EG713573.1|EG713573
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88981573|gb|CI027190.1|CI027190
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|8956388|gb|BE230175.1|BE230175
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCATTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88973200|gb|CI717729.1|CI717729
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|89170110|gb|CI039387.1|CI039387
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88435926|gb|CI514065.1|CI514065
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCNTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88955252|gb|CI721824.1|CI721824
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88565732|gb|CI496449.1|CI496449
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88473452|gb|CI410723.1|CI410723
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88563073|gb|CI493790.1|CI493790
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88905037|gb|CI712336.1|CI712336
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88547349|gb|CI477636.1|CI477636
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|7273822|gb|AU083366.1|AU083366
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCA-TTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAAGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88282122|gb|CI403518.1|CI403518
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|38470454|gb|CF954585.1|CF954585
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88237405|gb|CI237254.1|CI237254
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88666877|gb|CI719013.1|CI719013
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|58669464|gb|CK058150.1|CK058150
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|55410863|gb|CV723239.1|CV723239
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88982496|gb|CI027965.1|CI027965
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|56158237|gb|C91722.2|C91722
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCEST: gi|88904859|gb|CI712158.1|CI712158
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTT-GGTCGAGGAGCAGAAGATTGTCAAGAAGGTCC
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88561493|gb|CI492210.1|CI492210
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|89196872|gb|CI402626.1|CI402626
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: ACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88719483|gb|CI742993.1|CI742993
genomic: ACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTEST: gi|88509282|gb|CI436788.1|CI436788
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88379938|gb|CI513528.1|CI513528
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88309305|gb|CI655313.1|CI655313
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88594137|gb|CI713232.1|CI713232
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88293544|gb|CI505461.1|CI505461
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88674494|gb|CI728607.1|CI728607
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88289916|gb|CI525248.1|CI525248
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|15849588|gb|BI797850.1|BI797850
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|38470560|gb|CF954691.1|CF954691
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCEST: gi|88904692|gb|CI711991.1|CI711991
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGT-GCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCC
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88287335|gb|CI502692.1|CI502692
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88419855|gb|CI516304.1|CI516304
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAAGTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGTTGGAGGACCAGAAGATTGTCAAGAAGGTCCTEST: gi|88439988|gb|CI543905.1|CI543905
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGTTCCTEST: gi|88522071|gb|CI449804.1|CI449804
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAAGTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88419089|gb|CI511241.1|CI511241
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88378324|gb|CI503890.1|CI503890
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|2442900|gb|C74671.1|C74671
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|3762584|gb|AU029336.1|AU029336
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GAACCGTCCCATAATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTEST: gi|88669585|gb|CI723249.1|CI723249
genomic: GAACCGT-CCAT-ATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
EST: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAG GATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
genomic: GTGAACCGTCCATATGGTGGAGTGCTCTCTGGAACTGCAGTTAGGGAAAGgtcagtacat ... aactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCT
gaaaactttcaagatctgtattgtggtcttattagctgcaactgtaactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAAAGTAGAGCTCCTTTGTA
ctgtaac putative branch site (score: 59)
tcttatta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtcagtacataatgctagatattctgatgtgaaaactttcaagatctgtattgtggtcttattagctgcaactgtaactctgcagGATCATCCGTGCTTTCTTGGTCGAGGAGCAGAAGATTGTCAAGAAGGTCCTGAAAATACAGAAAACCAAGGACAAGACCGCAAAGTAGAGCTCCTTTGTA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT