Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctctcttaactcaaacaagtcagctcttgtttttattttgagtgtactgtcacccatttctacactctaatgtgcctatatgttttttgttttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC

Basic information

species Oryza sativa
transcript LOC_Os08g09250.1
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|428745|gb|D24899.1|D24899
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTNGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218502183|gb|FG956191.1|FG956191
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58601044|gb|CK011572.1|CK011572
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218501067|gb|FG950430.1|FG950430
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218480011|gb|FG946620.1|FG946620
EST:     TCTTGGCTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58686328|gb|CK075015.1|CK075015
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88430523|gb|CI569546.1|CI569546
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATCGACATACA                         -TTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|32948215|gb|BP184787.1|BP184787
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58667761|gb|CK056447.1|CK056447
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33657128|gb|CF279742.1|CF279742
EST:     CTTGGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: CTTGGG-TTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58591648|gb|CF989956.1|CF989956
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|29640866|gb|CB645873.1|CB645873
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88351718|gb|CI617443.1|CI617443
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88394794|gb|CI622668.1|CI622668
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58688050|gb|CK076737.1|CK076737
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58685195|gb|CK073882.1|CK073882
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88412126|gb|CI566855.1|CI566855
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATA-GTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218495099|gb|FG949613.1|FG949613
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58687296|gb|CK075983.1|CK075983
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|163917790|gb|EG712128.1|EG712128
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58682272|gb|CK070959.1|CK070959
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|2427789|gb|C72252.1|C72252
EST:     TCTTGGGTTTGGACCTGAGGACANCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGT
EST: gi|58591307|gb|CF989615.1|CF989615
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58598200|gb|CK008728.1|CK008728
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33657660|gb|CF280274.1|CF280274
EST:     CTTGGNGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: CTTGG-GTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58591117|gb|CF989425.1|CF989425
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|38483262|gb|CF967064.1|CF967064
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88359864|gb|CI617775.1|CI617775
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88731034|gb|CI754647.1|CI754647
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGA
EST: gi|218493123|gb|FG968720.1|FG968720
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|11442596|gb|BF430499.1|BF430499
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218495351|gb|FG943488.1|FG943488
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58596492|gb|CK007020.1|CK007020
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58691662|gb|CK080349.1|CK080349
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|4881143|gb|AU065442.1|AU065442
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|38565838|gb|CK085291.1|CK085291
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGAAATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58594310|gb|CF992618.1|CF992618
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58594873|gb|CF993181.1|CF993181
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33689145|gb|CF317384.1|CF317384
EST:     CTTGGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: CTTGGG-TTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33676817|gb|CF305056.1|CF305056
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88311554|gb|CI572610.1|CI572610
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58685397|gb|CK074084.1|CK074084
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58597234|gb|CK007762.1|CK007762
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|29680261|gb|CB676536.1|CB676536
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|7219920|gb|AU063009.2|AU063009
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGG-TGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCT
EST: gi|58677692|gb|CK066379.1|CK066379
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33655732|gb|CF278346.1|CF278346
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGNGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATG-GTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCT
EST: gi|2797325|gb|AA750619.1|AA750619
EST:     CTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: CTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|163920585|gb|EG709592.1|EG709592
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218498878|gb|FG949810.1|FG949810
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88373322|gb|CI614658.1|CI614658
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCCCTTGACTTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58591876|gb|CF990184.1|CF990184
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58599903|gb|CK010431.1|CK010431
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|11025939|gb|AU162540.1|AU162540
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33675751|gb|CF303990.1|CF303990
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218497481|gb|FG960433.1|FG960433
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|163921167|gb|EG710156.1|EG710156
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33684591|gb|CF312830.1|CF312830
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|38565594|gb|CK085047.1|CK085047
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218504775|gb|FG959637.1|FG959637
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTAGAATAACTACGACATTGGAGCAGGATTTGGGCATTTCGCT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTG-ATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCT
EST: gi|88421279|gb|CI569124.1|CI569124
EST:     TCTTGGGTTTGGACCTGAGGACAC-AACTTTGC-CTTGAATTGACATA-A                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58676433|gb|CK065120.1|CK065120
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTCGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58678135|gb|CK066822.1|CK066822
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58684222|gb|CK072909.1|CK072909
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|24468722|gb|CA305671.1|CA305671
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGT
EST: gi|218497868|gb|FG968294.1|FG968294
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58678123|gb|CK066810.1|CK066810
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|117235897|gb|CT847849.1|CT847849
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58694985|gb|CK083672.1|CK083672
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58588379|gb|CF986687.1|CF986687
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88417184|gb|CI576258.1|CI576258
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58600984|gb|CK011512.1|CK011512
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88417065|gb|CI573780.1|CI573780
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|24468858|gb|CA305807.1|CA305807
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGA
EST: gi|58682483|gb|CK071170.1|CK071170
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218485093|gb|FG946930.1|FG946930
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58594415|gb|CF992723.1|CF992723
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|55828156|gb|AU065471.3|AU065471
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|4968861|gb|AU065765.1|AU065765
EST:     TTGGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTTGACATACA                         -TTATGGGTGTT
genomic: TTGGG-TTTGGACCTGAGGACACCAACTTTGCACTTGAATT-GACATACAgtatgttatt ... tttttgatagATTATGG-TGTT
EST: gi|58678716|gb|CK067403.1|CK067403
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218483514|gb|FG958128.1|FG958128
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218485886|gb|FG950186.1|FG950186
EST:     TCTTGGGTTAGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33798425|gb|CF325070.1|CF325070
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58691986|gb|CK080673.1|CK080673
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88696013|gb|CI739588.1|CI739588
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88760508|gb|CI770064.1|CI770064
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|33794528|gb|CF323151.1|CF323151
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218493364|gb|FG968667.1|FG968667
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58585603|gb|CF983911.1|CF983911
EST:     GCGTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|55433119|gb|CV729591.1|CV729591
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|25777895|gb|CA752645.1|CA752645
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58586173|gb|CF984481.1|CF984481
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88723139|gb|CI746649.1|CI746649
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTT
EST: gi|29688512|gb|CB684787.1|CB684787
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58683044|gb|CK071731.1|CK071731
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTCGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|218504483|gb|FG959632.1|FG959632
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|38470686|gb|CF954817.1|CF954817
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58656585|gb|CK045265.1|CK045265
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58695737|gb|CK084424.1|CK084424
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58586439|gb|CF984747.1|CF984747
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|11233425|gb|AU164837.1|AU164837
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|9886121|gb|AU063011.2|AU063011
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88407924|gb|CI588953.1|CI588953
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58599370|gb|CK009898.1|CK009898
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|58679529|gb|CK068216.1|CK068216
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88452851|gb|CI572209.1|CI572209
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|4715714|gb|AU056830.1|AU056830
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|88306217|gb|CI636600.1|CI636600
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGAT
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGAT
EST: gi|218504445|gb|FG949639.1|FG949639
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
EST: gi|29683707|gb|CB679982.1|CB679982
EST:     TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACA                         ATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA
genomic: TCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 50 (upstream exon), 75 (downstream exon)
Score: 567

AAATTACTGAGGAAAAGAGATGTGCCTGAAGAGAAATATACGAATGCATTTCTTGGGTTTGGACCTGAGGACACCAACTTTGCACTTGAATTGACATACAgtatgttatt ... tttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

actgtcacccatttctacactctaatgtgcctatatgttttttgttttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC
                   ctctaat  putative branch site (score: 567)
                                   tgttttttgtttttt  putative PPT
                               tatatgttttttgttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ctctcttaactcaaacaagtcagctcttgtttttattttgagtgtactgtcacccatttctacactctaatgtgcctatatgttttttgttttttgatagATTATGGTGTTGATAAGTACGACATTGGAGCAGGATTTGGGCATTTCGCTATTGCAACTGAGGAC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCAG
- - - - - tcaaaca
- - - - - - - - - - - - - - - - - - - - - tgtactg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgccta