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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgatcatttgttgatttgttaataaatactatcttgtctgcttagtcaagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG

Basic information

species Oryza sativa
transcript LOC_Os08g03640.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g03640.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G066460_T01 (Zea mays), 3'ss of exon 2
gtgatcatttgttgatttgttaataaatactatcttgtctgcttagt---caagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
          ||    |||  |  ||   || | |  |     ||     |||| |  |||  |   | | |     ||  |   ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
----------gtgaccttggaagcaacacctctgtgatacagctaaaatgcaagcacacaa--aggcgcttttctcatttgtcatttgttccagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACCGTGGAAATTATCACCCCTGTGGAGCTGATCAAGAAGGGTGAAAAGGTGGGCTCGTCCGAGTCTG

upper sequence: LOC_Os08g03640.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G179976_T01 (Zea mays), 3'ss of exon 2
gtgatcatttgttgatttgttaataaatactatcttgtctgcttagt-caagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
          ||     ||  |  ||   || | ||  ||| | | | ||   |  | |   ||  |||||| |       || | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||
----------gtgagcctggaagcaatatctgtgtta-ctgttaaatgcacacacaccatgtcagtttctcatt-----cgtcatttttcagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTGATCAAGAAGGGTGAGAAGGTGGGCTCGTCCGAGTCTG

upper sequence: LOC_Os08g03640.1 (Oryza sativa), 3'ss of exon 3
lower sequence: PP1S39_424V6.1 (Physcomitrella patens), 3'ss of exon 2
--gtgatc--atttgttgatttgttaataaatactatcttgtctgcttag--tcaagta----gtcaactacatgttctca----ctgttcctatcttgtta-cagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
  | |||   | ||    | ||| |   | |||  || || ||    |    ||   ||    ||| |||    |||        ||| | |    |  ||| ||||| || ||||||||||| |||||||||||||||||||| ||||||||  | ||||| |||||| |  | |||||||||||||| || || |||||| |||
gtgagatttaaattacgcacttgatggcagatatcatgttttcacagtgacatctgatattttgtccactttccgtttctgacacctgatgcgtgttgattatcagGTCCTCAACATCCCCACGAAGATTAACAAGGGTACTGTCGAAATTATTGCTCCTGTAGAGCTCGTCCACAAGGGTGACAAGGTCGGATCATCCGAGGCTG

upper sequence: LOC_Os08g03640.1 (Oryza sativa), 3'ss of exon 3
lower sequence: PP1S38_196V6.1 (Physcomitrella patens), 3'ss of exon 2
------------------------------------------------------------------gtgatcatttgttgatttgttaataaatactatcttgtctgcttagtcaagtagtcaactacatgtt-ctcactgttcctatcttg----ttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
                                                                  |||  ||  |||   |||  | ||        |  || | | |  |  | |  || ||||  | ||| || ||   |   ||  ||     | ||||| |||||||| |||||||||||||||||||||||||| || |||||| ||||||| |||||  |  | |||||||||||||| || || |||||| |||
gtaaggtcttcggtatatggtatgttctatgaatgagattccagtcagtcaatttagcttatcgcagtgggcaagtgtcctttttctgatgtcgttctttatggcagttatgaaacgctgttaactgaaggtttctgacgaatagaatgctgaactctccagGTCCTTAACATTCCCACCAAGATTAACAAGGGTACTGTCGAGATTATCGCCCCTGTCGAGCTTGTCCACAAGGGTGACAAGGTCGGATCGTCCGAGGCTG

upper sequence: LOC_Os08g03640.1 (Oryza sativa), 3'ss of exon 3
lower sequence: EFJ38349 (Selaginella moellendorffii), 3'ss of exon 3
gtgatcatttgttgatttgttaataaatactatcttgtctgcttagtcaagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
               || ||  |||   ||||||| ||    |    |  ||  |  | ||  |     ||     |        || ||||| || ||||| |||||||||||||||||||| ||||| || ||  || |  | ||||||||||| || ||||| || || || |||||||| ||| | |
--------------gttcgtccatagg-actatctcgttctgtgttacttgtgattgattatctaaaaccatcaaac--------tttcagGTTCTCAACATTCCCACCAAGATTAACAAGGGAACTGTCGAGATCGTCTCGTCCGTGGAGCTCATCAAAAAGGGGGAGAAAGTTGGCTCCTCGGAGGCAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|218489103|gb|FG956733.1|FG956733
EST:     CACTAGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CACT-GGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33655147|gb|CF277761.1|CF277761
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGGCGGAAATTATCAC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGT-GGAAATTATCAC
EST: gi|29658964|gb|CB655239.1|CB655239
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218496943|gb|FG970430.1|FG970430
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218488187|gb|FG959861.1|FG959861
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33661354|gb|CF292321.1|CF292321
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAG
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAG
EST: gi|27577899|gb|CB000594.1|CB000594
EST:     CTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|45244969|gb|AB118193.1|AB118193
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTNTTTTTCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33683962|gb|CF312201.1|CF312201
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218491833|gb|FG961348.1|FG961348
EST:     TTCCCCCTGGCAACACTGGTCTGGATCAATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAA
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAA
EST: gi|58599651|gb|CK010179.1|CK010179
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|88298513|gb|CI563508.1|CI563508
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTNTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTTAACAAGGGGTACTGTGGAAATTATCA
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATT-AACAAGGG-TACTGTGGAAATTATCA
EST: gi|33795061|gb|CF323406.1|CF323406
EST:     TCCCCCTGGCAACACTGGNTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGGGTACTGTGGAAATTATCA
genomic: TCCCCCTGGCAACACTGG-TCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGG--TACTGTGGAAATTATCA
EST: gi|701413|gb|D47704.1|D47704
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATNATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|88730521|gb|CI754134.1|CI754134
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|300215839|gb|HO088465.1|HO088465
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218501412|gb|FG953630.1|FG953630
EST:     ACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAA-TATCACC
genomic: ACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|29680797|gb|CB677072.1|CB677072
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|55411514|gb|CV723890.1|CV723890
EST:     GGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: GGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|11025865|gb|AU162466.1|AU162466
EST:     CCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33795385|gb|CF323563.1|CF323563
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33692345|gb|CF320584.1|CF320584
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|33663396|gb|CF294363.1|CF294363
EST:     GTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|300216164|gb|HO087949.1|HO087949
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218499637|gb|FG959034.1|FG959034
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATT
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATT
EST: gi|2431208|gb|C73628.1|C73628
EST:     CTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218493687|gb|FG958524.1|FG958524
EST:     CTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218489669|gb|FG955161.1|FG955161
EST:     TTCCCCCTAGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|218488520|gb|FG953161.1|FG953161
EST:     CCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: CCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|29680796|gb|CB677071.1|CB677071
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|29658963|gb|CB655238.1|CB655238
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
EST: gi|2442363|gb|C74134.1|C74134
EST:     TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAG                         GTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC
genomic: TTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 69 (downstream exon)
Score: 216

GTTGGAGCTCCTGCTCGTGTTGGTCTTGTTGCTCCTGTTGATGTGGTGGTTCCCCCTGGCAACACTGGTCTGGATCCATCCCAGACCTCTTTCTTCCAGgtgatcattt ... cttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtctgcttagtcaagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG
                             ttctcac  putative branch site (score: 216)
                                      ttcctatctt  putative PPT
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgatcatttgttgatttgttaataaatactatcttgtctgcttagtcaagtagtcaactacatgttctcactgttcctatcttgttacagGTGCTTAACATCCCCACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAGCTCATTAAGAAGGGTGACAAGGTGGGCTCCTCCGAGTCTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC