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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA

Basic information

species Oryza sativa
transcript LOC_Os07g49150.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G056569_T01 (Zea mays), 3'ss of exon 3
gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcat---gaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
       | |  ||  |||| |    | |      ||||| || | || |    |   | ||| || || ||   ||| ||||| || ||||||||| |||||||| || |||||||| || || ||||||||| ||||||||||||| |||||||| |||||||| || || |||||||| || || || || |
------gtgctgtaacatctgtagacagtaatatttgcattatcaatgttcgtaatacctttttgtccttataatgaaggttgtaaaccgtgcagATTCACACATCAAAAATGACATTAGCTGACGATGTGAACTTGGAAGAGTTTGTTATGACCAAAGATGAGTTCTCGGGCGCTGATATTAAGGCCATCTGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G095593_T01 (Zea mays), 3'ss of exon 3
gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcat----gaatgttgtgaa-tcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
       | |  |    ||| | |    |      ||||| |  | || |    | | || || ||||| ||    ||| ||||| || | ||||||||||||||||| || |||||||| || |||||||||||| ||||||||||||| |||||||| || |||||||| ||||||||||| || ||||| || |
------gtactgtgacgtctgtaaatgataatatttgcattaacaatgttct-taataccctttgttcttattatagaaggttgtaaacttgtgcagATACACACATCGAAAATGACATTAGCTGATGATGTGAACTTGGAAGAGTTTGTTATGACCAAAGACGAGTTTTCGGGTGCTGATATTAAGGCAATCTGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GLYMA03G32800.1 (Glycine max), 3'ss of exon 4
-------------gtaaatatccattagtatcttttagaacttcagaat-gcatgataactgataagcagttcctttggtt------ctcatgaatgttgtgaatc----gtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
             || || | | | |  |   ||| |   |||||   |   ||  |||   ||    | |    ||  ||      || |    | || |   ||     |  ||||||||||||| | ||||||||| || |||||||| ||  | ||||| ||||| ||||||||||||||||| || || |||||||| |||||||||||||
gtaggcacattttgtgaa-agcaagttttcagtttcactgcttcactgttatatcttaat--atgcttattctacttaattatatgactaaaaggtcttatacttctgaaatttagATACACACATCAAGGATGACATTAGCTGATGATGTCAATTTAGAAGAATTTGTTATGACCAAGGATGAGTTCTCTGGAGCTGATATAAAAGCAATATGTA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GLYMA19G35510.1 (Glycine max), 3'ss of exon 4
----------gtaaatatccattagtatcttttagaacttca---gaatgcatgataactgataagcagttcctttggttctcat--gaatgttgtgaatc------gtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
           ||  | |     |  || |||| |   ||||     ||   | |  | |  ||  |   |   ||   |||||    || ||  |  |         |  ||||||| || || | ||||||||| || |||||||| ||| | ||||| ||||| ||||| ||||||||||| || || |||||||| |||||||||||||
gtcggaatgactagttctgtgaaaacatgtttttggttttcactgacatatcttaatattcctattctacttagttatatctcactaaaaggtcttatacttttgatatttagATACATACTTCAAGGATGACATTAGCTGATGATGTCAACTTAGAAGAATTTGTTATGACTAAGGATGAGTTCTCTGGAGCTGATATAAAAGCAATATGTA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GLYMA10G04920.1 (Glycine max), 3'ss of exon 4
-gtaaatatccattagtatcttttagaacttcagaatgcatgataac-tg-ataagcagttcctttg-gttctcatgaatgttgtgaatc----gtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
    || ||    |  | | | |    | |  |      ||  |||| || |||    ||||  |    | || ||  ||  |   | |      |  ||||||||||||| | ||||||||| || |||||||| ||| ||||||| ||||| ||||| || ||||| || || || |||||||| || ||||||||||
acccaacataagatgttgtttctgctgattctatgtgatatcttaacatgcatactttgttcaatcatatgcttatacattctcatactttggaattaagATACACACATCGAGGATGACATTAGCTGATGATGTCAACTTGGAAGAATTTGTTATGACTAAAGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: AT2G20140.1 (Arabidopsis thaliana), 3'ss of exon 4
-----gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctca--tgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
       || |    ||   ||  ||||     |||    |   |||    |    |    |    | |||| | |  || |||   | | |     ||||||||||||| |||||||| ||||| || ||||||||| | ||||||||||| ||||| || || ||||| || || |||||||| || |||||||| |
gttccacaactggtgatccttaagttttc---tttctttttttgtgaattttctagaaagatctgatcggtttttaattgcatgccattatt-----agATACACACATCAAAGATGACTTTGGCTGAAGATGTGAACTTAGAAGAGTTTGTAATGACAAAAGACGAGTTCTCAGGAGCTGATATAAAGGCAATATGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: Vv07s0005g05160.t01 (Vitis vinifera), 3'ss of exon 4
--------------------gtaaatatccattagtatcttttagaacttcagaatgc--atgataactga-taagcagttcc--tttggttctcat--------gaatgttgtgaatcg----tgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
                     |  | || || || |  || |     | || || | |   ||| |||||| | | ||   |    ||| ||   ||         ||| |  |  ||      |||||||||| ||||| | |||||||||||| |||||||| ||| ||||||| ||||| ||||| |||||||||||||| || |||||||| || |||||||| |
gtacatgtgtgtttaagattatgcaaatgcaatattcactatattttcatccgacttcttgtgacaactgaatcaccaaacctggcttgattactattactaagcaaatctcatttatttaaattgcagATACATACATCAAGGATGACATTGGCTGATGATGTTAACTTGGAAGAATTTGTTATGACTAAGGATGAGTTTTCTGGAGCTGATATAAAGGCAATATGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: PP1S12_207V6.1 (Physcomitrella patens), 3'ss of exon 3
----------gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
              ||| | |||   | || ||  ||| |    |   ||||  |  |||    || |  |||   |||  |    ||| | |   |||||||| || || ||||  |||||  |||| |||||||| |||||||| || || || |||||||||||||| ||||| |||||||| || ||||| || || |
tgtgaggaagaagcatagctattctaacctcttcaaacatagtgacttatgactaaagatc--taggtttttttcctctttttttggttattatgtgtgcagATTCATACTTCTAGAATGACTATGGCTGATGATGTAAACCTGGAGGAATTCGTAATGACCAAGGATGAATTTTCTGGTGCTGACATTAAAGCCATTTGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: PP1S109_234V6.1 (Physcomitrella patens), 3'ss of exon 3
gtaaatatccattag---tatcttttagaacttcagaatgcatgataactgataagc--agttcctttggtt-ctcatgaatgtt-------gtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
     | | ||||||   ||| | | |||| ||    ||  |   |   |||||| |  | ||| |||| |  ||  |    |||        |||    ||||||| || || ||||  |||||  |||| |||||||| ||||| || |||||||| |||||||| ||||||||||| |||||||| || ||||| || ||||
-----tcttcattagctttatgtgtgagaagttggagattgagttttcttgataaacgaaattcttttgatcgcttgttttggtttcttttaatgatctctgcagATTCATACTTCTAGAATGACTATGGCTGATGATGTAAACCTAGAGGAGTTTGTGATGACCAAAGATGAGTTTTCTGGTGCTGACATTAAAGCTATCTGTA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: PP1S4_277V6.1 (Physcomitrella patens), 3'ss of exon 4
----------------------------gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaa-------tgttgtga-----atc-gtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
                            ||  |     | | |  |    || |  ||||  ||| |   | | ||| |       |  | |||| |  | |        |||| |||     ||| ||||||||||| || ||||  |||||| |||| |||||||| ||| |||| || || || |||||||||||||| || || |||||||| || ||||| || || |
gtgatatttcgataacctatgatttgtggtcgaagcgtaattgcttgaggtatacattcatgatgaacc-ttattgacacctttcccagtaggttttgttaagactgttttgttatgatcttgatctgtgcagATACATACTTCTAGAATGACAATGGCTGATGATGTCAACTTGGAGGAATTCGTGATGACCAAGGATGAATTCTCTGGTGCTGACATTAAAGCTATCTGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: EFJ20767 (Selaginella moellendorffii), 3'ss of exon 4
gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
                                     | || |   |        |  | |||| || || | |    | ||  || ||||||| || ||||| |  |||||| |  | || ||||||||| | ||||||||||| ||||| ||||| || ||||| || ||||| ||||| ||||| || |
---------------------------------gtgacgtgttttttttctttgtgcgcgtttgtttttcctaaccactttggttcttgcagATCCATACATCGAGAATGACACTCTCTGACGATGTGAACTTTGAAGAGTTTGTGATGACGAAGGACGAATTTTCTGGAGCTGACATCAAGGCAATGTGCA

upper sequence: LOC_Os07g49150.1 (Oryza sativa), 3'ss of exon 3
lower sequence: EFJ32659 (Selaginella moellendorffii), 3'ss of exon 4
gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA
                                ||   | || | | |  |     |  | |||| || ||   |    | ||  || ||||||| || ||||| |  |||||| |  | || ||||||||| | ||||||||||| ||||| |||||||| || || || ||||| ||||| ||||| || |
------------------------------gtgacgtcgtgcttattttttg--tgcgcgtttgtttttcccaaccactttggttcttgcagATCCATACATCGAGAATGACACTCTCTGACGATGTGAACTTTGAAGAGTTTGTGATGACGAAGGATGAATTCTCTGGAGCTGACATCAAGGCAATGTGCA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86431050|gb|CI083473.1|CI083473
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88962611|gb|CI097763.1|CI097763
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATTTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86429409|gb|CI076090.1|CI076090
EST:     AGATAGAATTTCCTCAGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86503930|gb|CI146563.1|CI146563
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89195814|gb|CI007233.1|CI007233
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|87025727|gb|CI250221.1|CI250221
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88250012|gb|CI249861.1|CI249861
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88425068|gb|CI562383.1|CI562383
EST:     CTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: CTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88245879|gb|CI245728.1|CI245728
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACGTTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|87027889|gb|CI276245.1|CI276245
EST:     GGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: GGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86433656|gb|CI093999.1|CI093999
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86484153|gb|CI126786.1|CI126786
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89179714|gb|CI043993.1|CI043993
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|29642572|gb|CB647579.1|CB647579
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|25803585|gb|CA759546.1|CA759546
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86493797|gb|CI136430.1|CI136430
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88955567|gb|CI091856.1|CI091856
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|300216308|gb|HO088093.1|HO088093
EST:     GATA-AATTTCCTCTGCCAGATATTTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCT
genomic: GATAGAATTTCCTCTGCCAGATATT-AAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCT
EST: gi|88961307|gb|CI096700.1|CI096700
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88453406|gb|CI563285.1|CI563285
EST:     AACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|58695039|gb|CK083726.1|CK083726
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88982979|gb|CI250583.1|CI250583
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGATT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88438920|gb|CI531100.1|CI531100
EST:     GCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: GCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86858871|gb|CI275097.1|CI275097
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88957448|gb|CI095389.1|CI095389
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86505772|gb|CI148405.1|CI148405
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|3767639|gb|AU031666.1|AU031666
EST:     CGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATNTGAACCTGGAAGAGTTT
genomic: CGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88846141|gb|CI372909.1|CI372909
EST:     GATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: GATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86536640|gb|CI176846.1|CI176846
EST:     TGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: TGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88968825|gb|CI098932.1|CI098932
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88475412|gb|CI412683.1|CI412683
EST:     CTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: CTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88281675|gb|CI403071.1|CI403071
EST:     ATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: ATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|66915039|gb|CX101887.1|CX101887
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88226155|gb|CI226071.1|CI226071
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86420304|gb|CI056293.1|CI056293
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88197037|gb|CI196887.1|CI196887
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88199201|gb|CI199051.1|CI199051
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86489589|gb|CI132222.1|CI132222
EST:     GCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: GCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88833660|gb|CI077141.1|CI077141
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89175692|gb|CI042713.1|CI042713
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89167668|gb|CI109069.1|CI109069
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86433318|gb|CI093661.1|CI093661
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86498903|gb|CI141536.1|CI141536
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88449035|gb|CI560496.1|CI560496
EST:     GGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: GGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86489116|gb|CI131749.1|CI131749
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86483412|gb|CI126045.1|CI126045
EST:     CTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: CTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|38482146|gb|CF966203.1|CF966203
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86256042|gb|CI007758.1|CI007758
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89173378|gb|CI041271.1|CI041271
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88842097|gb|CI081353.1|CI081353
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89165967|gb|CI103057.1|CI103057
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89181006|gb|CI045089.1|CI045089
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86493230|gb|CI135863.1|CI135863
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86414008|gb|CI068215.1|CI068215
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88248302|gb|CI248151.1|CI248151
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|29643332|gb|CB648339.1|CB648339
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|427717|gb|D23852.1|D23852
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGNCATTGGCAGATGATGT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGT
EST: gi|89164890|gb|CI101978.1|CI101978
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|8956529|gb|BE230444.1|BE230444
EST:     AGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|58677646|gb|CK066333.1|CK066333
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86433435|gb|CI093778.1|CI093778
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATTTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88223363|gb|CI223212.1|CI223212
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86536125|gb|CI176331.1|CI176331
EST:     AATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88510314|gb|CI437820.1|CI437820
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAAGTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88907671|gb|CI091069.1|CI091069
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88975234|gb|CI023485.1|CI023485
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88409573|gb|CI562059.1|CI562059
EST:     CAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: CAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86510362|gb|CI152995.1|CI152995
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86593331|gb|CI257971.1|CI257971
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86493066|gb|CI135699.1|CI135699
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89166652|gb|CI103938.1|CI103938
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86500635|gb|CI143268.1|CI143268
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88968624|gb|CI098840.1|CI098840
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86499128|gb|CI141761.1|CI141761
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88849096|gb|CI087618.1|CI087618
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88222630|gb|CI222586.1|CI222586
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|58669958|gb|CK058644.1|CK058644
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88979178|gb|CI025680.1|CI025680
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|89195783|gb|CI007202.1|CI007202
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88228549|gb|CI228029.1|CI228029
EST:     TATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATTTTAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: TATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86494430|gb|CI137063.1|CI137063
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86488793|gb|CI131426.1|CI131426
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGCCATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88955390|gb|CI091482.1|CI091482
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|88227248|gb|CI228361.1|CI228361
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
EST: gi|86540338|gb|CI180544.1|CI180544
EST:     AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAG                         ATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT
genomic: AGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 74 (downstream exon)
Score: 29

CATCGAAAGTCTTGATCCAGCATTGCTACGCCCTGGTCGCATAGATCGGAAGATAGAATTTCCTCTGCCAGATATTAAAACTAGGCGGCGCATCTTCCAGgtaaatatcc ... aatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
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gtaaatatccattagtatcttttagaacttcagaatgcatgataactgataagcagttcctttggttctcatgaatgttgtgaatcgtgcagATACACACATCTAAGATGACATTGGCAGATGATGTGAACCTGGAAGAGTTTGTCATGACCAAGGATGAGTTTTCCGGTGCTGATATCAAAGCAATATGTA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA