1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gttatgtccttgaaatatatcccactttattgagaccattattgtcttgtcctgactttctagtttgtcattttctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAACTTTATCCCAAATACTATTACTGGTCTCAATGGTTCATTGTCATG
species | Oryza sativa |
transcript | LOC_Os07g22720.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CCAGATTTCCTCAGCGCAAGCAACCTGCAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAACEST: gi|117233831|gb|CT842341.1|CT842341
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAAC
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAACEST: gi|88301479|gb|CI597172.1|CI597172
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAAC
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAACEST: gi|88397241|gb|CI580751.1|CI580751
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAAC
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGAEST: gi|88329570|gb|CI650024.1|CI650024
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGA
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACCTAGGANTTAAEST: gi|88345084|gb|CI628338.1|CI628338
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCAC-TAGGACTTAA
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAEST: gi|88394949|gb|CI607676.1|CI607676
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAA
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGGAGGAGATCACCTAACEST: gi|88337269|gb|CI629559.1|CI629559
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAAC
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAEST: gi|29636053|gb|CB641062.1|CB641062
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGA
EST: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAG TTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAAC
genomic: CCAGATTTCCTCAGCGCAAGCAACCTGGAAAAGAGCTTGAGACCTCCAAGgttatgtcct ... tctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAAC
attgagaccattattgtcttgtcctgactttctagtttgtcattttctctttcagTTGTCACTAGGACTTAATGGAAGCTACACTTGCAGGAGATCACCTAACAACTTTATCCCAAATACTATTACTGGTCTCAATGGTTCATTGTCATG
tcctgac putative branch site (score: 2)
tttgtcattttctctt putative PPT
attattgt TA-rich tract