1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaagcgcttctccttgtgtacatattattctgtaatatataattattttctgttcttgctctctctaaaggttattagtaatgttgtatcatccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAA
species | Oryza sativa |
transcript | LOC_Os05g33810.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAAEST: gi|58656998|gb|CK045678.1|CK045678
genomic: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
EST: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAAEST: gi|29679742|gb|CB676017.1|CB676017
genomic: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
EST: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAAEST: gi|29643203|gb|CB648210.1|CB648210
genomic: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
EST: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAAEST: gi|58662678|gb|CK051364.1|CK051364
genomic: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
EST: CCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAAEST: gi|58670185|gb|CK058871.1|CK058871
genomic: CCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
EST: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCG TGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
genomic: AACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGgtaagcgctt ... tccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAA
tttctgttcttgctctctctaaaggttattagtaatgttgtatcatccattgtagTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAA
ctctaaa putative branch site (score: 22)
ttattagtaatgtt TA-rich tract