1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtcaggttcaattatcttaacatatctgtaaataagtgttcaagttgagatatatagtcccacttatatcttgcaccgcttgttctggtgttttgtaatttttgttttatatggaggggtaacacatcatattttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACTCTGCAATCAATGGGCTTCTTCCACATGAGATTCGAGTGAGGGAAATTA
species | Oryza sativa |
transcript | LOC_Os05g19954.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTCAGGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCAEST: gi|88691366|gb|CI733949.1|CI733949
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGT--GG---CGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCA
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTGGCGCATTTCACCACGEST: gi|88689634|gb|CI733210.1|CI733210
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGTGGCGCATTTCACCACG
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGEST: gi|33807142|gb|CF329453.1|CF329453
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATG
EST: GCTCTGCTCGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GCGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACEST: gi|88689372|gb|CI732948.1|CI732948
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCAC
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGEST: gi|88691736|gb|CI733814.1|CI733814
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATG
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTGGCGCATTTCACCACGEST: gi|88332716|gb|CI660234.1|CI660234
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGTGGCGCATTTCACCACG
EST: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGG GTCAGGTGGCGCATTTCACCACGCCTTTTTCCTACCATT
genomic: GCTCTGCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGgtcaggttca ... ttgtatctagGT--GG---CGCATTTCACCACGCCTTTTTCCTACCATT
tgttttgtaatttttgttttatatggaggggtaacacatcatattttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACTCTGCAATCAATGGGCTTCTTCCACATGAGATTCGAGTGAGGGAAATTA
gggtaac putative branch site (score: 4)
tgtaatttttgtttta TA-rich tract