1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gttcaattatcttaacatatctgtaaataagtgttcaagttgagatatatagtcccacttatatcttgcaccgcttgttctggtgttttgtaatttttgttttatatggaggggtaacacatcatattttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACTCTGCAATCAATGGGCTTCTTCCACATGAGATTCGAGTGAGGGAAATTA
species | Oryza sativa |
transcript | LOC_Os05g19954.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAG GTGGCGCATTTCACCACGCCTTTTTCCTACCATTEST: gi|88689372|gb|CI732948.1|CI732948
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATT
EST: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGT--G G---CGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGEST: gi|88570006|gb|CI661181.1|CI661181
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATG
EST: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAG GTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACEST: gi|33807142|gb|CF329453.1|CF329453
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCAC
EST: GCTCGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGG-C-G G---CGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACEST: gi|88288671|gb|CI663460.1|CI663460
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCAC
EST: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAG GTGGCGCATTTCACCAEST: gi|88689634|gb|CI733210.1|CI733210
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCA
EST: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGT--G G---CGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATG
genomic: GCTTGGTTGGAGCTGGCAGAACAGATACAGGTGTTCATGCATGGGGTCAGgttcaattat ... ttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATG
tgttttgtaatttttgttttatatggaggggtaacacatcatattttgtatctagGTGGCGCATTTCACCACGCCTTTTTCCTACCATTGTCTTGATAGCATGCACTCTGCAATCAATGGGCTTCTTCCACATGAGATTCGAGTGAGGGAAATTA
gggtaac putative branch site (score: 1)
tgtaatttttgtttta TA-rich tract