1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtatgtatatctttttcttttcaagtagagtcttttaagtatgggtctcatttgtgcaccattcaagaggaattactgaaaatccccccattttctctcaactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAGTAAGGATAATGTGTTGGTTGGAGACCTTGTAGTGAAAAACCAG
species | Oryza sativa |
transcript | LOC_Os05g04630.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29676557|gb|CB672832.1|CB672832
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58695107|gb|CK083794.1|CK083794
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58662934|gb|CK051620.1|CK051620
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29615431|gb|CB620443.1|CB620443
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29678514|gb|CB674789.1|CB674789
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33677805|gb|CF306044.1|CF306044
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGNTTCTGGGGCAATTTCTGGATTCTTCEST: gi|29634261|gb|CB639270.1|CB639270
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGG-TTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29680077|gb|CB676352.1|CB676352
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|117234267|gb|CT842364.1|CT842364
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|426282|gb|D22144.1|D22144
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGGAACTTGCAAAATTACAT-CGGTTCTTGGGGCAATTTEST: gi|33683171|gb|CF311410.1|CF311410
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCT-GGGGCAATTT
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTA--TACGGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|29676212|gb|CB672487.1|CB672487
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGG-TTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|4714998|gb|AU056115.1|AU056115
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGGCAATTTCTGGATTCTTCEST: gi|33655682|gb|CF278296.1|CF278296
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGG-CAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATT-CATACGGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|58588210|gb|CF986518.1|CF986518
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGG-TTCTGGGGCAATTTCTGGATTCTTC
EST: GCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58672443|gb|CK061129.1|CK061129
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33676712|gb|CF304951.1|CF304951
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58689178|gb|CK077865.1|CK077865
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58688874|gb|CK077561.1|CK077561
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58660269|gb|CK048949.1|CK048949
genomic: CGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58695208|gb|CK083895.1|CK083895
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29678428|gb|CB674703.1|CB674703
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29636076|gb|CB641085.1|CB641085
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGGTCTGGGGCAATTCCTGGATTCTEST: gi|58692954|gb|CK081641.1|CK081641
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCT
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58694420|gb|CK083107.1|CK083107
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29638564|gb|CB643573.1|CB643573
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58606761|gb|CK034794.1|CK034794
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACCATACGGTTCTGGGGCAATTT-TGGATTCTTCEST: gi|29676404|gb|CB672679.1|CB672679
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTAC-ATACGGTTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33654351|gb|CF276965.1|CF276965
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAAT-ACATACGGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|27577353|gb|CB000048.1|CB000048
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGG-TTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33670080|gb|CF298319.1|CF298319
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACCGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|29680749|gb|CB677024.1|CB677024
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATAC-GGTTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|25799139|gb|CA755100.1|CA755100
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29619013|gb|CB624025.1|CB624025
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29646767|gb|CB651774.1|CB651774
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33654754|gb|CF277368.1|CF277368
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|700515|gb|D46806.1|D46806
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CAACTCGAAAAAGTCGGNGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58608482|gb|CK036515.1|CK036515
genomic: CAACTCGAAAAAGTC-GAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58689258|gb|CK077945.1|CK077945
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29615278|gb|CB620290.1|CB620290
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|84117024|gb|CD150791.1|CD150791
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58693366|gb|CK082053.1|CK082053
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTTGGATTCTTEST: gi|29667624|gb|CB663899.1|CB663899
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCT-GGATTCTT
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCTGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29632395|gb|CB637404.1|CB637404
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58687763|gb|CK076450.1|CK076450
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58608866|gb|CK036899.1|CK036899
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTEST: gi|33795126|gb|CF323436.1|CF323436
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATT
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTT-CAAAGCAGATG GAGAAACTTGCAAAAT-ACATACGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|29645305|gb|CB650312.1|CB650312
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29635393|gb|CB640402.1|CB640402
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29616093|gb|CB621105.1|CB621105
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58690622|gb|CK079309.1|CK079309
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29634391|gb|CB639400.1|CB639400
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACCGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29638609|gb|CB643618.1|CB643618
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58692931|gb|CK081618.1|CK081618
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|2312447|gb|C28602.1|C28602
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33684656|gb|CF312895.1|CF312895
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATAEST: gi|29642216|gb|CB647223.1|CB647223
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|27577332|gb|CB000027.1|CB000027
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|58591597|gb|CF989905.1|CF989905
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33666702|gb|CF297669.1|CF297669
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACNGGTTCTGGGGCAATTTCTGGATTCTTCEST: gi|58691118|gb|CK079805.1|CK079805
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATAC-GGTTCTGGGGCAATTTCTGGATTCTTC
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29675833|gb|CB672108.1|CB672108
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29643726|gb|CB648733.1|CB648733
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|29616174|gb|CB621186.1|CB621186
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|86596757|gb|CI286670.1|CI286670
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAEST: gi|33655718|gb|CF278332.1|CF278332
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
EST: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATG GAGAAACTTGCAAAATTACATEST: gi|58693676|gb|CK082363.1|CK082363
genomic: CCTCCACAGCAGATACAACTCGAAAAAGTCGAGCTCTTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACAT
EST: TTAC-AAGCAGATG GAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
genomic: TTACAAAGCAGATGgtatgtatat ... aactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCA
tgcaccattcaagaggaattactgaaaatccccccattttctctcaactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAGTAAGGATAATGTGTTGGTTGGAGACCTTGTAGTGAAAAACCAG
tccccccattttctct CT-rich tract
aattact TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgtatatctttttcttttcaagtagagtcttttaagtatgggtctcatttgtgcaccattcaagaggaattactgaaaatccccccattttctctcaactgttcagGAGAAACTTGCAAAATTACATACGGTTCTGGGGCAATTTCTGGATTCTTCAGTAAGGATAATGTGTTGGTTGGAGACCTTGTAGTGAAAAACCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA