1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...tctatatgctctaacctttattttgtaccaacaagcatagtgccacacttattatgttttggtcctccttaaaaaccttgatgtccttgacttatttcagGAAACAGGGTGGTTACCTCTGCATGTTGTTGCACGGGATGAGAATGAAACTGTCGTTGGTGTTGTCCCACTTTACCTGAAAAG
species | Oryza sativa |
transcript | LOC_Os04g36062.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGACCCACGCATTCCTCTCAAGCTTAGAGGAATCGGGTTCTGCAGTGAAG GAAACAGGGTGGTTACCTCTGCATGTTGTTGCACGGGATGAGAAT
genomic: TGACCCACGCATTCCTCTCAAGCTTAGAGGAATCGGGTTCTGCAGTGAAGgtgagtgcat ... cttatttcagGAAACAGGGTGGTTACCTCTGCATGTTGTTGCACGGGATGAGAAT
cacttattatgttttggtcctccttaaaaaccttgatgtccttgacttatttcagGAAACAGGGTGGTTACCTCTGCATGTTGTTGCACGGGATGAGAATGAAACTGTCGTTGGTGTTGTCCCACTTTACCTGAAAAG
ccttgac putative branch site (score: 18)
cttatttc CT-rich tract
attatgtttt TA-rich tract