Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG

Basic information

species Oryza sativa
transcript LOC_Os04g35090.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G043737_T01 (Zea mays), 3'ss of exon 3
atgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctt-tgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG
 |     |  |  | ||    | |   |||  | |   | |||||     || ||| |  | |  |  |||    |    ||| |  ||  |  |||||||||||||   ||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||
-taccgaggagcagattaaagttaaccaattaggtacaaatctttaagttttgaattgttgatactgttatttaatcttctctttcctgtaacttatgtagGGGCCCAGGTCGTTTTGACGGCGACAGGCCAAGGTTTGGTGACAGGGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGCGATAAG

upper sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 3
lower sequence: GRMZM2G050925_T01 (Zea mays), 3'ss of exon 3
atgtgttgatgtggtttggtttaagttaatctgtt-catagtctttcctgatttaatggaggctgattctat-----actgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG---
      |||   |  |   || ||| ||| | |||   ||    ||  | | ||  |    | |||| ||||     | | ||   | |  |||  ||||||||||||||||   ||| |||||||   |||| ||||||||||| ||||| |||| |||||||||||| |||||||||||||| |||||||||||||| || |||   
----actgag--gaatatattaaagctaaccagttatgtatggattgttaagtttttaattgttgatgctattatttaatcttctctttgcttgtaatgtatgtagGGGCCCTGGTCGTTTTGAAG---ACAGACCAAGGTTTGGAGACAGGGATGAGTACCGTGGTGGCCCTCGTGGTGCTCCCGGTGACTTTGGTGGCGATAAGAGT

upper sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 3
lower sequence: AT5G41520.1 (Arabidopsis thaliana), 3'ss of exon 3
atgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG------
 |   |  || ||  |   || || |     | ||  || | | || || ||   ||     || |  |||  ||  | |  |  ||  | | |||  || ||||| |||||   ||| || || |||   |||||||||||||||||||| |||||||| ||||||       |   ||| || | |||||   ||         
gta-atcaatttgaatc--ttcaattctcagtcttgttattgtatcatggttacttgttaagtgttgatatg-tgacggtgttgatttggttttatacagTGGCCCTCCTCGTGGTGATGGAGAGAGG---AGGTTTGGTGACAGAGATGGATACCGTGGAGGTCCT---AAATCAGGTGGAGAGTATGGTGACAAGGCTGGAGCA

upper sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 3
lower sequence: Vv02s0025g00310.t01 (Vitis vinifera), 3'ss of exon 3
-------------------------------------------------------------------------------------------atgtgttgatgtggtt-tggtttaagtta--atctgttc--atagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgat----gtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG
                                                                                              |  || | || ||    | | | ||   |||||||   || | | |   |  |||  ||    || ||  | ||   | | || | ||    ||     | |  || || || |||||||||||||| || || ||||||||||||||| | |||||||||||||| ||||| || ||  |||| ||||| |||||||   ||   
gtaatgactcaattttgagttgatgttcggtgatttatttatttatttatttatttattattctgttgttaaacaatttggtgcgcattggggttaatggtttgattacaatgtgaattgggatctgtttggattgccatgttttgtttt-tgagttcttatgatgtaaaatgggttttgttgaaaattgtgattttcagTGGTCCACCTCGCTTTGAAGGAGATAGACCAAGGTTTGGTGACCGGGATGGGTACCGTGGAGGTCCACGAGGACCTCCAGGTGAGTTTGGTGACAAGGGT

upper sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 3
lower sequence: Vv16s0050g01160.t01 (Vitis vinifera), 3'ss of exon 3
--------atgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG
        || | |  ||    |||  | || |||     |||| |||  |||  | | ||     |   ||||  ||   |||| | |    ||| | | |   ||| ||||||||||||||||| || ||| | || |||||||||||  | |||||||| ||||| || ||||||||  |||| || || ||||||||||| |||
gtaattctatatctctatcattttttttctatgttgg---gttcttagatttttttcacttggcata--ttgat--taatgtgttaaattgtcttgagcttt---tagTGGCCCGCCTCGCTTTGATGGAGACCGTCCCAGGTTTGGTGATCGTGATGGGTATCGTGGAGGCCCTCGTGGCCCTCCAGGCGAGTTTGGTGGTGACAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88210309|gb|CI210158.1|CI210158
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|89167341|gb|CI252872.1|CI252872
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCATTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGC-TTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATG
EST: gi|218481193|gb|FG966663.1|FG966663
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88528083|gb|CI456291.1|CI456291
EST:     GCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86507218|gb|CI149851.1|CI149851
EST:     GCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|218482287|gb|FG965131.1|FG965131
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88200454|gb|CI200304.1|CI200304
EST:     GACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGTCCAAGGTTTGGTGACAGAGATGG
genomic: GACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|87026440|gb|CI252394.1|CI252394
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86529638|gb|CI169844.1|CI169844
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33692611|gb|CF320850.1|CF320850
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88212266|gb|CI211906.1|CI211906
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86546249|gb|CI186455.1|CI186455
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86499220|gb|CI141853.1|CI141853
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|87033407|gb|CI188031.1|CI188031
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|66915713|gb|CX102561.1|CX102561
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86421760|gb|CI057749.1|CI057749
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86594409|gb|CI251281.1|CI251281
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88280432|gb|CI401630.1|CI401630
EST:     TTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: TTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86433709|gb|CI094052.1|CI094052
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86419608|gb|CI054409.1|CI054409
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88516154|gb|CI443808.1|CI443808
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|55412965|gb|CV725341.1|CV725341
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTT
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTT
EST: gi|86432736|gb|CI086347.1|CI086347
EST:     CTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|89198350|gb|CI007410.1|CI007410
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88842123|gb|CI081379.1|CI081379
EST:     CCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88381690|gb|CI682360.1|CI682360
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGA
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGA
EST: gi|86526933|gb|CI167139.1|CI167139
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86594617|gb|CI253516.1|CI253516
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88277714|gb|CI398516.1|CI398516
EST:     TTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: TTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|218480537|gb|FG944727.1|FG944727
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88203900|gb|CI203749.1|CI203749
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33692612|gb|CF320851.1|CF320851
EST:     AGGCCACCTGGCCGCCCATTTGGTTTTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88216009|gb|CI215858.1|CI215858
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88239215|gb|CI240377.1|CI240377
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88519607|gb|CI447261.1|CI447261
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCCCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88239247|gb|CI240409.1|CI240409
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86253123|gb|CI058048.1|CI058048
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86523576|gb|CI163782.1|CI163782
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88243851|gb|CI242973.1|CI242973
EST:     CACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|58592650|gb|CF990958.1|CF990958
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88202110|gb|CI202465.1|CI202465
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCTACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88202863|gb|CI200715.1|CI200715
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCTACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|58594471|gb|CF992779.1|CF992779
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|87031526|gb|CI263899.1|CI263899
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|55432258|gb|CV729149.1|CV729149
EST:     GCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86593786|gb|CI266466.1|CI266466
EST:     AGGCCACCTGTCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|29682504|gb|CB678779.1|CB678779
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86527716|gb|CI167922.1|CI167922
EST:     CCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88996278|gb|CI037569.1|CI037569
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88213131|gb|CI212980.1|CI212980
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86855283|gb|CI265209.1|CI265209
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33803723|gb|CF327735.1|CF327735
EST:     GCCACCTGGCCGCCCATTTGGCTCTGGCCCACCTGGCGACCGCCCAAG                         TGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86533138|gb|CI173344.1|CI173344
EST:     ACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: ACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86418247|gb|CI032456.1|CI032456
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88205003|gb|CI204852.1|CI204852
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86427810|gb|CI072907.1|CI072907
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88239817|gb|CI238979.1|CI238979
EST:     CCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGTCCAAGGTTTGGTGACAGAGATGG
genomic: CCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88216819|gb|CI216421.1|CI216421
EST:     AGGCCACCTGTCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|58662116|gb|CK050796.1|CK050796
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33666692|gb|CF297659.1|CF297659
EST:     AGGCCACCTGGCCGCCCATTTGGTTTTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|89198932|gb|CI253006.1|CI253006
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCAAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88470828|gb|CI408099.1|CI408099
EST:     AGGCCACCTGGCCGCCCATTTGGTTTTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86594661|gb|CI255737.1|CI255737
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88478921|gb|CI416192.1|CI416192
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86424385|gb|CI063146.1|CI063146
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86421380|gb|CI057369.1|CI057369
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88204770|gb|CI204619.1|CI204619
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88217348|gb|CI217197.1|CI217197
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88962670|gb|CI023770.1|CI023770
EST:     GGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: -GGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88241294|gb|CI241143.1|CI241143
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86484997|gb|CI127630.1|CI127630
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88545290|gb|CI474840.1|CI474840
EST:     CGACCGCCCAAG                         GGGCCCGCCTCGGTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88208276|gb|CI208125.1|CI208125
EST:     TGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: TGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88203439|gb|CI203288.1|CI203288
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86500562|gb|CI143195.1|CI143195
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|218483589|gb|FG966694.1|FG966694
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAATGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86509948|gb|CI152581.1|CI152581
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86602233|gb|CI262702.1|CI262702
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|38473025|gb|CF957157.1|CF957157
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTAGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATAG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88474562|gb|CI411833.1|CI411833
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33688819|gb|CF317058.1|CF317058
EST:     GGCCACCTGGCCGCCCATTATGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GGCCACCTGGCCGCCCATT-TGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|218488268|gb|FG947103.1|FG947103
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86257921|gb|CI064274.1|CI064274
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33666693|gb|CF297660.1|CF297660
EST:     GGCCACCTGGCCGCCCANTTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAA
genomic: GGCCACCTGGCCGCCCA-TTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAA
EST: gi|88505664|gb|CI433170.1|CI433170
EST:     CATTTGGTTTTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTNAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86510065|gb|CI152698.1|CI152698
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88489106|gb|CI426378.1|CI426378
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|33692922|gb|CF321161.1|CF321161
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86508469|gb|CI151102.1|CI151102
EST:     ACCTGGCCGCCCATTTGGTTCTGGTCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: ACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|55409436|gb|CV721812.1|CV721812
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGT
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGT
EST: gi|33803725|gb|CF327736.1|CF327736
EST:     GCCACCTGGCCGCCCATTTGGCTCTGGCCCACCTGGCGACCGCCCAAG                         TGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86432442|gb|CI086053.1|CI086053
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88202941|gb|CI202791.1|CI202791
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|29682503|gb|CB678778.1|CB678778
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88216994|gb|CI216698.1|CI216698
EST:     CCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: CCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88575576|gb|CI669721.1|CI669721
EST:     GGCCACCTGGCCGCCCATTTGGTTCTGGCCCCAC-TGGCGACCGCCCAAG                         GGGCCCGCCTC
genomic: GGCCACCTGGCCGCCCATTTGGTTCTGGCCC-ACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTC
EST: gi|87016924|gb|CI284258.1|CI284258
EST:     AGGCCACCTGGCCGCCCATTTGGTTTTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|55432256|gb|CV729148.1|CV729148
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88214275|gb|CI214124.1|CI214124
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86524461|gb|CI164667.1|CI164667
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88215650|gb|CI215499.1|CI215499
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|89172906|gb|CI040799.1|CI040799
EST:     AGGCCACCTGACCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|55438242|gb|CV732416.1|CV732416
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|89187024|gb|CI053427.1|CI053427
EST:     GGCCACCT-GCACGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: GGCCACCTGGC-CGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88205244|gb|CI205093.1|CI205093
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|86506961|gb|CI149594.1|CI149594
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
EST: gi|88210969|gb|CI212609.1|CI212609
EST:     AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAG                         GGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG
genomic: AGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 72 (downstream exon)
Score: 47

ACCTTAACCTGCCATCTGAGATTGTGCCTGCCACACTCAAGAAGTCTGCCAGGCCACCTGGCCGCCCATTTGGTTCTGGCCCACCTGGCGACCGCCCAAGgtatacatat ... atgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG
                   attctata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atgtgttgatgtggtttggtttaagttaatctgttcatagtctttcctgatttaatggaggctgattctatactgttgattctctttgcgatgtatgtagGGGCCCGCCTCGCTTTGAAGGGGACAGGCCAAGGTTTGGTGACAGAGATGGGTACCGTGGTGGTCCTCGTGGTGCTCCTGGTGACTTTGGTGGTGAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - gttgatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gctgatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctgttga