1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...atactggtttacgcatgctcatgccacatgatgcttctagaattattcagactaacatgtatcttgtattcctgtgtggtttgtgtttggtctcttgcagCTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTCAAAATAAAATGCTAAAG
species | Oryza sativa |
transcript | LOC_Os03g17930.3 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAG CTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTCEST: gi|29639433|gb|CB644442.1|CB644442
genomic: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAGgcaagcttct ... tctcttgcagCTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTC
EST: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAG CTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTCEST: gi|33809156|gb|CF330462.1|CF330462
genomic: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAGgcaagcttct ... tctcttgcagCTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTC
EST: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAG CTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTC
genomic: GTTTGAACTTGCGCAGGCGTACCACAAGGTGGTAGCAGAGAGGGATGCAGgcaagcttct ... tctcttgcagCTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTC
ttcagactaacatgtatcttgtattcctgtgtggtttgtgtttggtctcttgcagCTATTGCAGTTAAAGAGAAACTAGAGTCTCTTTGTAGGGAGTTTCAGCGTCAAAATAAAATGCTAAAG
gactaac putative branch site (score: 1)
tctcttgc putative PPT
ttgtatt TA-rich tract