1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...ctgatgccttgtggttgcatgactatgtagttggccagttactccgttctggtacttggtagttttctaatgaaccgatgtccaacaatgtatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGCTCTGAAGCATCGCCAGAATAAGAGGCAGCAACAGCGGATTAT
species | Oryza sativa |
transcript | LOC_Os03g13970.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCAAG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88314956|gb|CI610015.1|CI610015
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88763078|gb|CI772634.1|CI772634
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|163919850|gb|EG710352.1|EG710352
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|33657883|gb|CF280497.1|CF280497
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|33654150|gb|CF276764.1|CF276764
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGAC-T-GGCAAGATCCTCGCTTGT-TG-ACG G-CTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88721373|gb|CI744672.1|CI744672
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88445093|gb|CI589571.1|CI589571
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: CTCGTCACTCCCACCAGCGACCCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGGAGCAATTCAGGTTGCTCEST: gi|88390322|gb|CI605775.1|CI605775
genomic: CTCGTCACTCCCACCAGCGACC-TCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88391146|gb|CI595400.1|CI595400
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88745425|gb|CI768785.1|CI768785
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|58663975|gb|CK052661.1|CK052661
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|33679625|gb|CF307864.1|CF307864
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGT-ACTCCCACCAGCGACCTCG-CAAGATCCTCGCTTG-ATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCA-CAATTCAGGTTGCTCEST: gi|88358175|gb|CI605100.1|CI605100
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88354858|gb|CI614136.1|CI614136
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCCAATTCAGGTTGCTEST: gi|88357310|gb|CI622159.1|CI622159
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGC-AATTCAGGTTGCT
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88826558|gb|CI777123.1|CI777123
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGEST: gi|33681541|gb|CF309780.1|CF309780
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTG
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88434013|gb|CI586891.1|CI586891
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88390341|gb|CI607377.1|CI607377
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88414977|gb|CI601809.1|CI601809
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCCCG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88346731|gb|CI657282.1|CI657282
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88736526|gb|CI760034.1|CI760034
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88723553|gb|CI747063.1|CI747063
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCEST: gi|88735528|gb|CI759036.1|CI759036
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|33654616|gb|CF277230.1|CF277230
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCA-CGACCTCGGCAAGATCCT-GCTTGT-TGC-CG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|2309803|gb|C25958.1|C25958
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88362712|gb|CI608861.1|CI608861
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: CTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACCG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTEST: gi|88354146|gb|CI637712.1|CI637712
genomic: CTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCAC-Ggtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCT
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|33681744|gb|CF309983.1|CF309983
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88425160|gb|CI564677.1|CI564677
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88356912|gb|CI620800.1|CI620800
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATC-TCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88742964|gb|CI766472.1|CI766472
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88360077|gb|CI610191.1|CI610191
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88742045|gb|CI765553.1|CI765553
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88718520|gb|CI742030.1|CI742030
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88729610|gb|CI751413.1|CI751413
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88736188|gb|CI759696.1|CI759696
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|163926719|gb|EG713735.1|EG713735
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88394930|gb|CI607657.1|CI607657
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|218488524|gb|FG963297.1|FG963297
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|88417172|gb|CI576246.1|CI576246
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: CTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCEST: gi|86890984|gb|CI305857.1|CI305857
genomic: CTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGC-TTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
EST: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACG GACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
genomic: GCTCGTCACTCCCACCAGCGACCTCGGCAAGATCCTCGCTTGTATGCACGgtgagttccc ... tatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTC
gttctggtacttggtagttttctaatgaaccgatgtccaacaatgtatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGCTCTGAAGCATCGCCAGAATAAGAGGCAGCAACAGCGGATTAT
ttctaat putative branch site (score: 151)
ttttctaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ctgatgccttgtggttgcatgactatgtagttggccagttactccgttctggtacttggtagttttctaatgaaccgatgtccaacaatgtatgctgcagGACTTGAAGTTGGTGCTGAAGCAAATTTGGCTGCAGCAATTCAGGTTGCTCAGCTGGCTCTGAAGCATCGCCAGAATAAGAGGCAGCAACAGCGGATTAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
-tgatgcc
- - - - - - - -tgcatga
- - - - - - - - - - - - - - - - - - - - - - - - - -gtacttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgaaccg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caacaat