1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...aaattagtatatcgtgctgtattgctagacaccagaatgtgccccctttatgctaaatatcatattgccgccatattttgtttacaatctttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGATTATAACTTTGATCATCCAG
species | Oryza sativa |
transcript | LOC_Os02g17320.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAG GAGTCTTTTTATTATGGGTTGNCTGATGAGGAATTGGEST: gi|29643325|gb|CB648332.1|CB648332
genomic: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAGgtttgtccct ... ttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGG
EST: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAG GAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGATEST: gi|44678675|gb|CR292109.1|CR292109
genomic: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAGgtttgtccct ... ttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGAT
EST: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTAGTTGCTCAG GAGTCTTTTTATAATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGATEST: gi|33799739|gb|CF325735.1|CF325735
genomic: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAGgtttgtccct ... ttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGAT
EST: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAG GAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGATEST: gi|58591679|gb|CF989987.1|CF989987
genomic: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAGgtttgtccct ... ttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGAT
EST: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAG GAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGAT
genomic: AAATGATAATCGATCAGCTACGTGATCAGCGTGTAGTTGTTGTTACTCAGgtttgtccct ... ttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGAT
ctttatgctaaatatcatattgccgccatattttgtttacaatctttctttgcagGAGTCTTTTTATTATGGGTTGTCTGATGAGGAATTGGTCCATGTTCATGATTATAACTTTGATCATCCAG
tgctaaa putative branch site (score: 2)
tctttctttgc putative PPT
atattttgtttacaat TA-rich tract