1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtgcttttttgtcatttattaaactgatctgtcaagcgtacttgtttttgcttgtttttaacacataaaggttatgcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGATCCAG
species | Oryza sativa |
transcript | LOC_Os02g07870.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGEST: gi|58663310|gb|CK051996.1|CK051996
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGEST: gi|58673192|gb|CK061878.1|CK061878
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGEST: gi|88403893|gb|CI601303.1|CI601303
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTEST: gi|58662103|gb|CK050783.1|CK050783
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTT
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGAGAACATTTTTGATGGEST: gi|58663588|gb|CK052274.1|CK052274
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGG-GAACATTTTTGATGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGEST: gi|58666816|gb|CK055502.1|CK055502
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGEST: gi|27547953|gb|CA765929.2|CA765929
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
EST: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAG CCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
genomic: AGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGgtgctttttt ... gcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGG
gtcaagcgtacttgtttttgcttgtttttaacacataaaggttatgcctgcacagCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGATCCAG
ttttaac putative branch site (score: 13)
tttttaacacataaa TA-rich tract