1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtcagctttcctcattgtaacttcatgtttctgtaactccatgatccataattttaacacagcataatattggtcaattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATAC
species | Oryza sativa |
transcript | LOC_Os01g62244.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|58588737|gb|CF987045.1|CF987045
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33656879|gb|CF279493.1|CF279493
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33803960|gb|CF327856.1|CF327856
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|86904971|gb|CI289118.1|CI289118
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|218503159|gb|FG952517.1|FG952517
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88334977|gb|CI648752.1|CI648752
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCACAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATCTCTATTCTTCATCCGCCTGGTGATGEST: gi|569797|gb|D40646.1|D40646
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTNAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCEST: gi|33663070|gb|CF294037.1|CF294037
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCC
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|570100|gb|D40949.1|D40949
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88327290|gb|CI645067.1|CI645067
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33687166|gb|CF315405.1|CF315405
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|572403|gb|D41914.1|D41914
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAG-TTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATNCATTTCTATTCTTCATCCGC-TGGTGATGEST: gi|33691223|gb|CF319462.1|CF319462
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|571730|gb|D41241.1|D41241
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|218489286|gb|FG970461.1|FG970461
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88343130|gb|CI641656.1|CI641656
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33663820|gb|CF294787.1|CF294787
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33682530|gb|CF310769.1|CF310769
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88327435|gb|CI645222.1|CI645222
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33680805|gb|CF309044.1|CF309044
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88332627|gb|CI651787.1|CI651787
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33810888|gb|CF331335.1|CF331335
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33693885|gb|CF322124.1|CF322124
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33682529|gb|CF310768.1|CF310768
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33655965|gb|CF278579.1|CF278579
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTEST: gi|218483069|gb|FG969518.1|FG969518
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCT
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88347542|gb|CI637482.1|CI637482
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88302898|gb|CI668744.1|CI668744
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88362508|gb|CI623848.1|CI623848
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|570083|gb|D40932.1|D40932
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGGACGTGGTATGCATTTCTATTCTTCAATCCGCCTEST: gi|218494870|gb|FG960750.1|FG960750
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGG-ACGTG-TATGCATTTCTATTCTTCA-TCCGCCT
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88396391|gb|CI598503.1|CI598503
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|571742|gb|D41253.1|D41253
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG NTTATCCGGATGGACGTGTATNCATTTCTATTCTTEST: gi|570188|gb|D41037.1|D41037
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTT
EST: TAACAGTCCTCCAANTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACCGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATEST: gi|218478108|gb|FG955329.1|FG955329
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGAC-GTGTATGCATTTCTATTCTTCATCCGCCTGGTGAT
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|218494462|gb|FG953577.1|FG953577
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88327593|gb|CI646786.1|CI646786
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: CAGTCCTCCAACTGGTCAGAATTTACCCTCAGAAATGTGGC-TCCAAATG TTTTTATCCGGANTGGACGTGTATGCEST: gi|33687165|gb|CF315404.1|CF315404
genomic: CAGTCCTCCAACTG-TCAGA-TTTACC-TCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTT--ATCCGGA-TGGACGTGTATGC
EST: AGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88310491|gb|CI659281.1|CI659281
genomic: AGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|218494770|gb|FG953209.1|FG953209
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|33656745|gb|CF279359.1|CF279359
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCAEST: gi|218505567|gb|FG957426.1|FG957426
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCA
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88396389|gb|CI598501.1|CI598501
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88979399|gb|CI025901.1|CI025901
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88765871|gb|CI774961.1|CI774961
genomic: TACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCAEST: gi|58590948|gb|CF989256.1|CF989256
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCA
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|88403835|gb|CI611490.1|CI611490
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGEST: gi|58592613|gb|CF990921.1|CF990921
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
EST: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATG TTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
genomic: TAACAGTCCTCCAACTGTCAGATTTACCTCAGAAATGTGGCATCCAAATGgtcagctttc ... caattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATG
tctgtaactccatgatccataattttaacacagcataatattggtcaattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATAC
ttttaac putative branch site (score: 2)
atccataattttaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtcagctttcctcattgtaacttcatgtttctgtaactccatgatccataattttaacacagcataatattggtcaattgccagTTTATCCGGATGGACGTGTATGCATTTCTATTCTTCATCCGCCTGGTGATGATCCCAATGGTTATGAGCTTGCGAGTGAGCGTTGGACACCAGTGCATAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT