Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgtgcgtgcgtgcgtgctccggtgcaagtcagctcatctaccaaaaaaaatgtgcatctctctgaatctctccctctctctctgatcgatgcagGTGAAGCTGGACTACCCGTACGAGTTCCTGACCGGCGTCGGCGGCCGGTGCGGCCCGGTGGCGCACGGCGGATCGACGGTGGTTCGGTCGCTGACGTTCC

Basic information

species Oryza sativa
transcript LOC_Os01g51050.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

accaaaaaaaatgtgcatctctctgaatctctccctctctctctgatcgatgcagGTGAAGCTGGACTACCCGTACGAGTTCCTGACCGGCGTCGGCGGCCGGTGCGGCCCGGTGGCGCACGGCGGATCGACGGTGGTTCGGTCGCTGACGTTCC
                                        ctctgat  putative branch site (score: 4)
                           tctctccctctctctc  CT-rich tract
     aaaaaatgt  TA-rich tract