1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
...aggcgtattcatgaattgttgttccatatgtgtataaatgcacaggaagtgcgtatataccatccacttcaagtaatctaactgagcttaaaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTTCTGCTGTCATTTTGGGTGGAGGCACTGGAGTTCAACTCTTTCCTCTGA
species | Oryza sativa |
transcript | LOC_Os01g44220.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88851990|gb|CI679548.1|CI679548
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88306534|gb|CI671286.1|CI671286
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88461692|gb|CI695535.1|CI695535
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88587225|gb|CI704961.1|CI704961
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88959416|gb|CI685897.1|CI685897
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88580407|gb|CI697335.1|CI697335
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88731649|gb|CI755262.1|CI755262
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88722340|gb|CI745850.1|CI745850
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: TGGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88468807|gb|CI696804.1|CI696804
genomic: T-GGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCTTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88463678|gb|CI696154.1|CI696154
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88321573|gb|CI672705.1|CI672705
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88730612|gb|CI754225.1|CI754225
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88722803|gb|CI746313.1|CI746313
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88424033|gb|CI689732.1|CI689732
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88591296|gb|CI708221.1|CI708221
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCTTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|1632029|gb|C19758.1|C19758
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88359940|gb|CI679709.1|CI679709
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCANGTTEST: gi|88586455|gb|CI704156.1|CI704156
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88959057|gb|CI685793.1|CI685793
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88361961|gb|CI682139.1|CI682139
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88404910|gb|CI685344.1|CI685344
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88587570|gb|CI705326.1|CI705326
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATACAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88722100|gb|CI745427.1|CI745427
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88586431|gb|CI704132.1|CI704132
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACCATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88728671|gb|CI752181.1|CI752181
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88578726|gb|CI687673.1|CI687673
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88379094|gb|CI681927.1|CI681927
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88582923|gb|CI699388.1|CI699388
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|95101434|gb|CI693182.1|CI693182
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88721785|gb|CI745084.1|CI745084
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88724785|gb|CI748044.1|CI748044
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88851762|gb|CI674964.1|CI674964
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88581614|gb|CI698814.1|CI698814
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88334475|gb|CI676249.1|CI676249
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCTTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88590335|gb|CI709181.1|CI709181
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88388472|gb|CI683249.1|CI683249
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCACATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88321531|gb|CI672660.1|CI672660
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88726224|gb|CI749879.1|CI749879
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|95101252|gb|CI692993.1|CI692993
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88576805|gb|CI673331.1|CI673331
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88578267|gb|CI687187.1|CI687187
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88731555|gb|CI755168.1|CI755168
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88369747|gb|CI680418.1|CI680418
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88721115|gb|CI744414.1|CI744414
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|1631746|gb|C19475.1|C19475
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88369721|gb|CI680389.1|CI680389
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88587485|gb|CI705235.1|CI705235
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCACATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88414466|gb|CI691632.1|CI691632
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88727392|gb|CI751047.1|CI751047
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88695102|gb|CI739140.1|CI739140
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88467402|gb|CI696785.1|CI696785
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88394230|gb|CI684905.1|CI684905
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88583741|gb|CI701244.1|CI701244
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|88722816|gb|CI746326.1|CI746326
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTEST: gi|66922783|gb|CX109631.1|CX109631
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
EST: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCT CATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
genomic: CTGGAACTGCACGATGTGTGTTCACATCAGATGCTGATAGAGACACTCCTgtaagcattt ... aaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTT
gaagtgcgtatataccatccacttcaagtaatctaactgagcttaaaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTTCTGCTGTCATTTTGGGTGGAGGCACTGGAGTTCAACTCTTTCCTCTGA
atctaac putative branch site (score: 2)
ttaaaatttaca TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aggcgtattcatgaattgttgttccatatgtgtataaatgcacaggaagtgcgtatataccatccacttcaagtaatctaactgagcttaaaatttacagCATCTTCGGACACAATCCTCCCGAAAGAATTATGCTGATGCAAGCCACGTTTCTGCTGTCATTTTGGGTGGAGGCACTGGAGTTCAACTCTTTCCTCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG