Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtacttccaatattacttctagatagacatttacttctttaattgagatactaaccaacgacatctcttcaacttttgcagATTAAGTGGTTACCATACCACACAAATGAGGCTTCAAGCCTGACCCTGAACTCGATGTGCAATCGAGACTCTGACTATTTCATGTACCAGTGCCCATTGA

Basic information

species Oryza sativa
transcript LOC_Os01g28740.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acatttacttctttaattgagatactaaccaacgacatctcttcaacttttgcagATTAAGTGGTTACCATACCACACAAATGAGGCTTCAAGCCTGACCCTGAACTCGATGTGCAATCGAGACTCTGACTATTTCATGTACCAGTGCCCATTGA
                      tactaac  putative branch site (score: 0)
                                     tctcttcaactttt  putative PPT
        ttctttaatt  TA-rich tract