1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gcaagctagcccgtcttctccgactccggcgactccaattcttgatttctttccaccacgatttctcattgcatcatggattggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGATCGGGTGCTTCCCGGTGTACCTCTCCATCTTCCGGAAGCAGCCGGAGA
species | Oryza sativa |
transcript | LOC_Os01g11650.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGEST: gi|29659363|gb|CB655638.1|CB655638
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGEST: gi|29613920|gb|CB618933.1|CB618933
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGEST: gi|29638553|gb|CB643562.1|CB643562
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGEST: gi|117238603|gb|CT842448.1|CT842448
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGEST: gi|29669794|gb|CB666069.1|CB666069
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
EST: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAG AAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
genomic: TGCACACCTTCGTCCCCGACGTCGTTGACTCCATCGGCAAGGGCATCGAGgcaagctagc ... ggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCG
attcttgatttctttccaccacgatttctcattgcatcatggattggtggtgcagAAGCTGATCGAGGAAGGGGCGGTGGAGCTGGTGGTGCCCGGGGTGCTGCCGATCGGGTGCTTCCCGGTGTACCTCTCCATCTTCCGGAAGCAGCCGGAGA
tcttgat putative branch site (score: 30)
atttcttt TA-rich tract