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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttgttgacatacagatccacgtcttacaaaaatataaaagattacaaatgcagcggaaaaagataaaagcgagctaagcctgaagacttgactcctgcagCGGGCGACTCCATTCCACAGGCAATCCTTGACGGCAGCGACGAAACCAACCTTTTCGAGACATCTTCAACTGGGAAGGACTTCAACTCTGGTGTGGGGGA

Basic information

species Oryza sativa
transcript 13114.m00167
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaatgcagcggaaaaagataaaagcgagctaagcctgaagacttgactcctgcagCGGGCGACTCCATTCCACAGGCAATCCTTGACGGCAGCGACGAAACCAACCTTTTCGAGACATCTTCAACTGGGAAGGACTTCAACTCTGGTGTGGGGGA
                                        acttgac  putative branch site (score: 4)
                                              ctcctgc  CT-rich tract
           aaaaagataaaa  TA-rich tract