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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...agatgtgatatgcagtgcctgcacggtttctgtctctcattttgaaacaaattcataaattgagatttgaaataacacatctcttctcatcttgtgtcagGGAAAAGTTCCATTGCTCTCGCTCCATGCCATAGAACAGATACACATATTCATCTTTGTTCTAGCCATCACCCATGTCGTCCTCAGCGCCGTCACCGTTC

Basic information

species Oryza sativa
transcript 13113.m00224
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aacaaattcataaattgagatttgaaataacacatctcttctcatcttgtgtcagGGAAAAGTTCCATTGCTCTCGCTCCATGCCATAGAACAGATACACATATTCATCTTTGTTCTAGCCATCACCCATGTCGTCCTCAGCGCCGTCACCGTTC
                        aaataac  putative branch site (score: 2)
                                catctcttctcatctt  CT-rich tract
         ataaattgagatttga  TA-rich tract