1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' |
gtttgtttgaactcgttttgtgcttgtaaccacttctatatttctgatcatgtcctgtgctaatgcttacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTGATTGAGGACATGAAATCCAAG
species | Oryza sativa |
transcript | LOC_Os01g56490.1 |
intron # | 24 |
splice site | 3' |
intron type | U2 |
EST: AAGATCTGATAACATTGAGAGTTGCCTTTTATCATGCTACAAACAATGAG GTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTGEST: gi|38483147|gb|CF966949.1|CF966949
genomic: AAGATCTGATAACATTGAGAGTTGCCTTTTATCATGCTACAAACAATGAGgtttgtttga ... tacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTG
EST: TGAGAGTTGCCTTTTATCATGCTACAAACAATGAG GTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTGEST: gi|58652982|gb|CK041662.1|CK041662
genomic: TGAGAGTTGCCTTTTATCATGCTACAAACAATGAGgtttgtttga ... tacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTG
EST: AAGATCTGATAACATTGAGAGTTGCCTTTTATCATGCTACAAACAATGAG GTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTGEST: gi|33810373|gb|CF331077.1|CF331077
genomic: AAGATCTGATAACATTGAGAGTTGCCTTTTATCATGCTACAAACAATGAGgtttgtttga ... tacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTG
EST: ATGCTACAAACAATGAG GTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTG
genomic: ATGCTACAAACAATGAGgtttgtttga ... tacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTG
cttgtaaccacttctatatttctgatcatgtcctgtgctaatgcttacttatcagGTGTCATCTCACTTTATACGGTTGCCAAAAGGTAGCACTATGTCTGATTTGATTGAGGACATGAAATCCAAG
tgcttac putative branch site (score: 15)
cttactt CT-rich tract
ttctatattt TA-rich tract