1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtgagtgcatattgtctttatgaaaagcttacttttgtagaattttttttaaaaagaatttcttttatttctgtagGGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTTCAACAGAGTATTGACAG
species | Oryza sativa |
transcript | LOC_Os04g14654.3 |
intron # | 20 |
splice site | 3' |
intron type | U2 |
EST: TTGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGA GGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTTEST: gi|28298184|gb|CB238414.1|CB238414
genomic: TTGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGAgtgagtgcat ... atttctgtagGGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTT
EST: TTGGAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGA GGTAGTTCGGCCATTAEST: gi|86834309|gb|CI344069.1|CI344069
genomic: TTGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGAgtgagtgcat ... atttctgtagGGTAGTTCGGCCATTA
EST: TTGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGA GGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTT
genomic: TTGAAGAACTGTTGAAACTATTGCCAGGTCCTCATCTGGATTTGAAAAGAgtgagtgcat ... atttctgtagGGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTT
gaaaagcttacttttgtagaattttttttaaaaagaatttcttttatttctgtagGGTAGTTCGGCCATTAATTCTTCATTGGATGTACACCAAGGTTTGGGGCTTCAACAGAGTATTGACAG
agcttac putative branch site (score: 10)
tttcttttatttctgt putative PPT
ttttgtagaatttttt TA-rich tract