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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgctgttgctcaccttccgtcctggcccgtcgcagcgttagacgagcagttagtaggcttgcgcgtgtgtttttcctcgtttgtctttttgagTTGTGTGGGGCATGGTTACACCG

Basic information

species Oryza sativa
transcript LOC_Os12g28990.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tagacgagcagttagtaggcttgcgcgtgtgtttttcctcgtttgtctttttgagTTGTGTGGGGCATGGTTACACCG
                             tgtttttcctcgtttg  CT-rich tract
                             tgttttt  TA-rich tract