1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaattactgaatacattttaacttaaaacatgtagctgtatcatgtatagtttttcctataatattgctgtgaaccttttttgacatatactttttcaatgtttgcagACAGGATTAATGCAAAAATGGGTGAAG
species | Oryza sativa |
transcript | LOC_Os12g27520.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAAGGATGGACATTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGAT ACAGGATTAATGCAAAAATGGGTGAAGEST: gi|29668017|gb|CB664292.1|CB664292
genomic: CAAGGATGGACACTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGATgtaattactg ... atgtttgcagACAGGATTAATGCAAAAATGGGTGAAG
EST: CAAGGATGGACACTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGAT ACAGGATTAATGCAAAAATGGGTGAAGEST: gi|29689119|gb|CB685394.1|CB685394
genomic: CAAGGATGGACACTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGATgtaattactg ... atgtttgcagACAGGATTAATGCAAAAATGGGTGAAG
EST: CAAGGATGGACACTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGAT ACAGGATTAATGCAAAAATGGGTGAAG
genomic: CAAGGATGGACACTTTGTCTTTGCTGTTGGAGACAACCTCACACCACGATgtaattactg ... atgtttgcagACAGGATTAATGCAAAAATGGGTGAAG
ttcctataatattgctgtgaaccttttttgacatatactttttcaatgtttgcagACAGGATTAATGCAAAAATGGGTGAAG
ttttgac putative branch site (score: 34)
atatactttttcaat TA-rich tract