Skip to another splice site:
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 5'  3'   		6  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcattagtacgttgaagtatttaattttacatatgcacatatacctaattaaattcccaatgtattaactaattaactcttgttaatttcgttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCGATCGGTTTGCTCTACCTGAACACCCGCCGGACCCTGCTCGAAAAATACA

Basic information

species Oryza sativa
transcript LOC_Os12g26290.6
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os12g26290.6 (Oryza sativa), 3'ss of exon 2
lower sequence: GRMZM2G312997_T01 (Zea mays), 3'ss of exon 1
------tcattagtacgttgaagtatttaattttacatatgc----acatatacctaattaaattcccaatgtattaactaattaactcttgttaatttcgttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCGATCGGTTTGCTCTACCTGAACACCCGCCGGACCCTGCTCGAAAAATACA
      ||  |  |  ||||||||||||||||| ||||||||    |   ||||||||||||||| |||||||||| | |  ||     || ||||||||    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || |||||||||||||| |||||||| |||||||||||||
tattcctcgatcattagttgaagtatttaattt-acatatgctgatatgcatacctaattaaatttccaatgtattgatttgtt-----ttcttaatttc----atgtagTTCGTTCATGCATTTGACAAGAGAAACCTGTGGCACAAGATGCCTGTTCTGATCGGTTTACTGTACCTGAACACCCGTCGGACCCTCCTCGAAAAATACA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29614999|gb|CB620012.1|CB620012
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29625915|gb|CB630926.1|CB630926
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29673746|gb|CB670021.1|CB670021
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88406507|gb|CI599000.1|CI599000
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29627764|gb|CB632775.1|CB632775
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29673709|gb|CB669984.1|CB669984
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88326464|gb|CI659896.1|CI659896
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33676616|gb|CF304855.1|CF304855
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29623660|gb|CB628671.1|CB628671
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29626272|gb|CB631283.1|CB631283
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29622413|gb|CB627424.1|CB627424
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88367577|gb|CI568349.1|CI568349
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29674051|gb|CB670326.1|CB670326
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29622490|gb|CB627501.1|CB627501
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88327757|gb|CI657801.1|CI657801
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88342941|gb|CI640274.1|CI640274
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88349484|gb|CI653763.1|CI653763
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88571735|gb|CI663108.1|CI663108
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29625519|gb|CB630530.1|CB630530
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88325711|gb|CI648155.1|CI648155
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33675485|gb|CF303724.1|CF303724
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACC
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACC
EST: gi|29625911|gb|CB630922.1|CB630922
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29625830|gb|CB630841.1|CB630841
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88337257|gb|CI629547.1|CI629547
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29626293|gb|CB631304.1|CB631304
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29679634|gb|CB675909.1|CB675909
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29623589|gb|CB628600.1|CB628600
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33675576|gb|CF303815.1|CF303815
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88347126|gb|CI631206.1|CI631206
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88347940|gb|CI636033.1|CI636033
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88303028|gb|CI668874.1|CI668874
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29627804|gb|CB632815.1|CB632815
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88406617|gb|CI599110.1|CI599110
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88385226|gb|CI630327.1|CI630327
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTCGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29626125|gb|CB631136.1|CB631136
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88338511|gb|CI645765.1|CI645765
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29628820|gb|CB633831.1|CB633831
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29624043|gb|CB629054.1|CB629054
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29627901|gb|CB632912.1|CB632912
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33675586|gb|CF303825.1|CF303825
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88305364|gb|CI630526.1|CI630526
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29628685|gb|CB633696.1|CB633696
EST:     CCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGACTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCC
genomic: CCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGG-CTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCC
EST: gi|29628226|gb|CB633237.1|CB633237
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29625787|gb|CB630798.1|CB630798
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29627802|gb|CB632813.1|CB632813
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29623658|gb|CB628669.1|CB628669
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88339870|gb|CI649127.1|CI649127
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29627625|gb|CB632636.1|CB632636
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29623848|gb|CB628859.1|CB628859
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|4968860|gb|AU065764.1|AU065764
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|29622060|gb|CB627071.1|CB627071
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33675591|gb|CF303830.1|CF303830
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88345083|gb|CI628337.1|CI628337
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|88430254|gb|CI567273.1|CI567273
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
EST: gi|33676870|gb|CF305109.1|CF305109
EST:     TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTA                         TTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG
genomic: TCCGTGATGTTTTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTAgtacgttttt ... gttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taattaaattcccaatgtattaactaattaactcttgttaatttcgttcatgtagTTCATTCATGCATTTGACAAGAGAAACCTGTGGCACAAGGTGCCTGTTCCGATCGGTTTGCTCTACCTGAACACCCGCCGGACCCTGCTCGAAAAATACA
                                         tttcgttc  CT-rich tract
                 tattaactaattaact  TA-rich tract