1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtcagtgaaagtctcatgtgtttcagtgcctgttctaatgggtttctgttcctctgtatgactcttgatttgtagcttatgtggctcctctgatgatcttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCA
species | Oryza sativa |
transcript | LOC_Os12g23170.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATG GATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGEST: gi|88400647|gb|CI596068.1|CI596068
genomic: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGgtcagtgaaa ... ttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
EST: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATG GATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGEST: gi|88370897|gb|CI595009.1|CI595009
genomic: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGgtcagtgaaa ... ttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
EST: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATG GATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGEST: gi|55409077|gb|CV721453.1|CV721453
genomic: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGgtcagtgaaa ... ttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
EST: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATG GATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGEST: gi|88400586|gb|CI596007.1|CI596007
genomic: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGgtcagtgaaa ... ttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
EST: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATG GATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
genomic: CTGATAATTCGACCGCGAATGTGACCGTCGACGAGTACCACCGCTACATGgtcagtgaaa ... ttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCG
ctgtatgactcttgatttgtagcttatgtggctcctctgatgatcttctttgcagGATGATGTGGACAACATGGTGAGAGTGGGCTTCGACGCGTATCGCTTCTCGATCTCCTGGTCTCGCATTTTCCCCA
ctctgat putative branch site (score: 9)
tcttctttgc putative PPT
ttgattt TA-rich tract