1 5' 3' | 2 5' 3' | 3 5' 3' |
...tgtgagctaatttcttactgcatatatccctcccaccagcatacttttttagtttctgttatatttgctgacttcacatgttgtaacacatctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCGTGCAACCTGTACAGAATATACAATATTTATGAGTGCTGACAATACATC
species | Oryza sativa |
transcript | LOC_Os12g06630.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCEST: gi|33810127|gb|CF330953.1|CF330953
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCEST: gi|58672719|gb|CK061405.1|CK061405
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCEST: gi|58656494|gb|CK045174.1|CK045174
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCEST: gi|58680304|gb|CK068991.1|CK068991
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCEST: gi|11170889|gb|AU163519.1|AU163519
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
EST: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAG CTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
genomic: AAGGGATAAATCTACCCAAACTTACAACCTATATCTATGTCTTAGCTCAGgtaagccttt ... tctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCC
tttttagtttctgttatatttgctgacttcacatgttgtaacacatctcatgtagCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTATCGGCGAAAAGATACTCCCGTGCAACCTGTACAGAATATACAATATTTATGAGTGCTGACAATACATC
ttgtaac putative branch site (score: 2)
tttctgttatattt TA-rich tract