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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC

Basic information

species Oryza sativa
transcript LOC_Os11g06890.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AC216067.3_FGT002 (Zea mays), 3'ss of exon 2
---cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaatt-ctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
    |||  | |   |||       || | || ||     |    |||        |    | ||   |||  | |  || || |     |    || |  |||||| |||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || ||||| 
taatctcc-tttctttgagcgtttcttcttttaagga---ggcagtacatgcttatttgggaattgaaattttattgacttattttctgggccactgatttcagGGCGAATGCACAACAGCCGAAGCTTTTTGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCTCTGTACGGTCTCATTGTTGGAATTATCCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GRMZM2G177005_T01 (Zea mays), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctga-tatctcttg--ttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
    |  | |||     | | ||    | | |    |     |||     ||         ||| | |   | | ||| ||  | |||       | |  |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || || ||||| 
---agtagctcacatgcaactttctcctggcgtttcttcttttacagaggaggcatgggaattgaaattttagtttgactaatttttgggccaccgatttcagGGCAAATGCGCAACAGCCAAAGCTTTTCGTTGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCTCTCTATGGTCTAATTGTTGGAATTATCCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA13G03470.1 (Glycine max), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttg-agagcttgaggctactcctaa-gctgcctactttggattacaattctga-tatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
 ||| |     |  ||||   ||||| | | ||| ||      ||    |     |    |||    | |  ||  |||| ||       |   | |||  || || ||||| |||||||| ||||| || || |||||||| || ||| | |||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
tctcag---ctaaaactatagtttgtttcgtagatctatgtaatatgtatgttattattaactgaatacttgaacactgagtaaggtgattcctttttgttagAGCTAATGCCCAGCAACCGAAGCTGTTTGTTGGCATGATTCTTATCTTGATTTTCGCTGAAGCTCTTGCTCTGTATGGCCTCATTGTGGGTATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA16G24220.1 (Glycine max), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctact--cctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
  |   | || |   |   ||| |   ||  ||  ||     || |    |||||| | |  |   || |   | | ||| ||  |         || |||| |||||||| ||||| ||||||||||| || || ||||| |||||||||||||| || || ||| | ||  | || ||||||||||| ||||||||||||
-atgcatttttagttcactcctgttgattatgaatttactaatagtaatttaagcttcattttgacgaat-tgaatatgacatgccggtaactcttttgcagAGCAAATGCTCAGCAGCCAAAGCTTTTTGTTGGAATGATACTCATCCTCATTTTTGCTGAGGCGTTGGCATTATACGGTCTCATTGTTGGCATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA01G37320.1 (Glycine max), 3'ss of exon 1
cctcggtgttcatgactaccc--tttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
  |     |    || | | |   |  |  ||      || |  || ||   |  |      | | || ||  |       |  |     || | || | || |||||||| || || ||||||||||| || || ||||| ||||| ||||| || || || ||| | ||  ||||||| |||||||| ||||||||||||
tttttaactgagagattgctcaactcttactggataaatgtgtttaatctcga--ttttagttattgaatatgacctgctgaaattggactgttttttgtagAGCAAATGCCCAACAGCCAAAGCTTTTTGTTGGGATGATTCTCATTCTCATCTTTGCTGAGGCGTTGGCATTGTATGGACTCATTGTTGGCATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA06G00980.1 (Glycine max), 3'ss of exon 2
--------cctcggtgttcatgactaccctttgt-gttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
          | |   ||  |  ||  | ||||| |||| ||  ||||          |       | | ||  |  | ||| |||||        |     |   ||| || |||||||| |||||||| ||||| || || ||||| |||||||||||||| || ||||| |||||||| |||||||||||||| || || ||||| 
atatatctttttgcctttactagcttgcatttgttgttgtgaatttga---------cagtggattttccttttacaataatactgattaagtcaatctacttctacagAGCCAATGCACAACAACCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCACTTGCCCTTTATGGTCTCATTGTTGGTATTATCCTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA14G23990.1 (Glycine max), 3'ss of exon 2
--cctcggtgttcatgactaccctttgtgttg-agagct---tgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
  | |   |   |   | ||   ||||| |   ||| ||   | | | || |  ||| |||  ||||| |||     | |  | ||  || | ||    ||| |||||| ||||| ||||| || ||||| || || || ||||| || ||| | |||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
tgcttttctcagctaaattatagtttgtttcatagatctatgtaatgttattattaa-ctgaatactt-ggacgctgagtaaggtaattcctttt----ttgtcagGGCTAATGCCCAGCAGCCGAAGCTGTTTGTTGGTATGATTCTTATCTTGATTTTCGCTGAAGCTCTTGCTCTGTATGGCCTCATTGTGGGTATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA04G00950.2 (Glycine max), 3'ss of exon 1
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctg--cctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
      | |   |   | || ||  |     |   |||  |  | |   | | ||    | | ||  |  | ||| ||||| |      |  |  |  |||| || ||||||||||| ||||| ||||| || || ||||| |||||||||||||| || ||||| |||||||| |||||||| || || || || ||||| 
-gaacatatatctttttgcctttactagcatgcatttgttgtgaatttgacggtggattttccttttacaataatactgat-taatcaatctgcttctgcagAGCCAATGCACAGCAGCCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCTCTTGCCCTTTATGGTCTAATCGTTGGTATTATCCTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA12G04090.1 (Glycine max), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagag----cttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
  |   | ||  |||        |   | || |      ||      | ||||||  |    | |||   ||  | ||   | |  |  | ||  | |  |||| || ||||||||||| ||||||||||| || || ||||| ||||| ||||| || || || || |||||||||||||| |||||||| || || ||||| 
tgtatattttgctgatagtttgatacatggatataccttttataatgattcctaa--tagaaattttaccttgaagtttgaacaatttatcttcttat--gcagAGCCAATGCACAGCAGCCAAAGCTTTTTGTTGGAATGATTCTCATTCTCATCTTTGCTGAGGCTCTTGCCCTGTATGGACTCATTGTTGGTATTATCCTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA11G11760.1 (Glycine max), 3'ss of exon 2
cctcggtgttcatgactaccctttg-tgttgagagcttgaggctactcctaa---gctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
| | | || | |    ||  |   | | | |      | | | || ||||||     | | || ||||    | || | ||| |    || |     |  |||| || ||||||||||| ||||||||||| || || ||||| || || |||||||| || ||||| ||||| || |||||||||||||| || || ||||| 
cattgatggttaattttatacagggatatagtttttataatgatattcctaataaaattcttattttga---agaagtttga-acaatttatcttcttccgcagAGCCAATGCACAGCAGCCAAAGCTTTTTGTTGGAATGATTCTTATTCTCATTTTTGCTGAAGCTCTTGCTCTCTATGGTCTCATTGTTGGTATTATCCTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: GLYMA11G07980.1 (Glycine max), 3'ss of exon 1
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatat-ctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
 | |  |||| |  |  |   | |          || || | |  |    | ||  ||| ||| | |    | | ||| || ||     || | || | || |||||||| || || ||||||||||| || || ||||| ||||| ||||| || || || ||| | ||  ||||||| |||||||| ||||||||||||
acgctttgttaaccaagagattgttcaactcttactggatgattgtgtctaact-tctattttagttattgaatttgacatgctgaaaatgttttttgtagAGCAAATGCCCAACAGCCAAAGCTTTTTGTTGGGATGATTCTCATTCTCATCTTTGCTGAGGCGTTGGCATTGTATGGACTCATTGTTGGCATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT4G38920.1 (Arabidopsis thaliana), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattaca--attctgatatct---cttgttggt-gttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
      | |  | ||  |    |  ||     |   | |    | |  | || || |||       ||| |  ||| |||||       |||| | | | || |||||| ||||| || || |||||||||||||| || ||||| || |||||||||||||| ||||| ||||| || || |||||||| || || |||||  | 
-----ttctctaggatgaaatataatggaagaaatatcaattcaattgtgag-tgtctatcccctgttatatcattttgatacgcaaatttgtggtttgatgacagGGCCAATGCTCAACAGCCAAAGCTTTTCGTTGGTATGATTCTTATCCTCATTTTCGCTGAAGCTCTTGCTCTATACGGTCTCATCGTCGGGATCATTTTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT1G75630.2 (Arabidopsis thaliana), 3'ss of exon 3
------------------------------------------------------------------------------------------cctcggtgttcatgact-accctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgata-tctct-tgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                                                                                          |  | |   |     || |  |||||| ||            |||    | | | || |  ||  ||   |  || || || ||||  |||     || |||| || ||||| || ||||| ||||| || ||||| ||||| || || ||||| || || ||||||||||| ||||||||||||||||| || |||||||||
gtaacgttgtttgatattagatttggtgttggttaagaactgtctggattgaatctttgaagcagattaggataaattaccagtagaattcaacaggcgttgcacctgatgctttgttttcttttacatcaactatatgtga-cagcatcattcagaactctgttttgttaatctcaatgtcttattttgcagAGCGAATGCGCAACAACCGAAGCTGTTTGTGGGAATGATTCTGATTCTCATCTTTGCGGAAGCGCTTGCACTGTATGGTCTCATTGTTGGTATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT4G34720.1 (Arabidopsis thaliana), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgaga-gcttgaggctactcct-aagctgccta-ctttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
    | |  ||     | | | |  |  ||| | ||||   | || |    ||| |   || | ||||  |   | |      | |    ||  | ||  |||||||||||| ||||| || ||||| || || || ||||| || ||||| |||||||||||||||||||| || || || || ||||| || ||||| || 
----gtttgtctctcgtcctcctgctactgatacgctttgaggtattatggaagatatgtaacattggtgtttgacttacccttttgcgattcttttt--cagGGCAAATGCTCAGCAGCCTAAGCTCTTTGTTGGGATGATTCTTATCCTTATTTTCGCAGAAGCGCTTGCTCTTTACGGGCTTATTGTAGGAATCATTCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT1G19910.1 (Arabidopsis thaliana), 3'ss of exon 2
--cctcggtgttcatgactaccctttgtgttgagagcttgaggct-actcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
    |||  | || |||      | |  |||      | ||     | |  | |   |  |  | ||  ||  ||||||| | | | || || |||||| ||| || |||||||| ||||| ||| | || ||||| ||||| || || ||||| || || ||||| ||||||||||| ||||||||||| || |||||||||
atagtcgcagctcctgatattgttgtaagtttttgtatggaactcgagttttgaaaggtgttatgtgt-ttgtaattctggtgtgtgtt-tttgtgttg-cagAGCGAATGCACAACAACCTAAGTTGTTTGTGGGAATGATTCTGATTCTCATCTTTGCTGAAGCACTTGCCCTGTACGGTCTCATTGTTGGTATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: AT1G75630.1 (Arabidopsis thaliana), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgata-tctct-tgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
    || |||       |  |||||| ||            |||    | | | || |  ||  ||   |  || || || ||||  |||     || |||| || ||||| || ||||| ||||| || ||||| ||||| || || ||||| || || ||||||||||| ||||||||||||||||| || |||||||||
-acaggcgttgcacctgatgctttgttttcttttacatcaactatatgtga-cagcatcattcagaactctgttttgttaatctcaatgtcttattttgcagAGCGAATGCGCAACAACCGAAGCTGTTTGTGGGAATGATTCTGATTCTCATCTTTGCGGAAGCGCTTGCACTGTATGGTCTCATTGTTGGTATCATCCTC

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: Vv18s0001g13630.t01 (Vitis vinifera), 3'ss of exon 2
cctcggtgttcatgactac--cctttgtgttgagagcttgaggctactcctaagctgcctactttg-gattacaattctgatatctcttgttg--gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
  |   | || | || | |  ||||||  ||   |  |  |  | | ||   |  |   | ||||  || ||   || || | |   ||||||   | || |||| || ||||| ||||| |||||||||||||| || ||||||||||| ||||| || || ||||| |||||||||||||| || ||||| ||||||||||| 
-tttcatatt-aggatttctgcctttgcctttttacatctattcaattct--atttatttcctttaagagtatgtttttg-tctgaattgttgttatatttgcagAGCCAATGCTCAGCAGCCAAAGCTTTTCGTTGGAATGATCCTCATTCTCATCTTTGCTGAAGCTCTTGCCCTGTATGGACTTATTGTTGGCATCATCCTA

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: Vv18s0001g02650.t01 (Vitis vinifera), 3'ss of exon 2
-cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
 | ||  |   |    |   | ||||   ||| |  |  |  |  |   | |      |   |  | ||||  || |     || |||    | ||  |||||| ||||||||||| |||||||| || ||||| ||||| ||||||||||| || || ||||||||||| || ||||| || ||||| |||||||| || 
acttctctcccctcccccctcatttgaaatgaaacatcaaatcctccattgatggtgttgtatatgtttacc-ttttttcccctgttgggattattttcagGGCTAATGCACAGCAGCCAAAGCTGTTTGTGGGTATGATTCTCATCCTCATCTTTGCTGAAGCGCTTGCTCTTTATGGCCTGATTGTCGGCATCATTCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: PP1S45_100V6.1 (Physcomitrella patens), 3'ss of exon 2
----------------------------------------------------------------------------------------cctcggtgttcatgactac---cctttgtgttgagagcttgaggctactcctaag------ctgcctactttggattacaattctgatatctct--tgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                                                                                         |   | ||||| |   |    | |  |  |||||        |  | |  |  |        |  |  | |||||     |  | |  |      ||     ||| ||||||| ||||| ||||| || ||||| |||||||| |||||||| |||||||||||||| || ||||||||| ||||||| || || || ||||| ||| | 
gtagcggacgaacccttgcaatgtggtgatgtatgggaatacgtagtgaagttggaaagagagatgtaatcgggattgaaatggattcgcagagggttcacggtgatggacatgaggtttgaggatgcagagtgagttatgggagggtttggtgtgttgtggatgtggttgttaacgtggaggatggcatcgtttgcagGGCGAATGCTCAGCAGCCGAAGCTGTTCGTGGGGATGATCCTGATCCTCATTTTCGCTGAGGCGCTTGCCTTGTATGGACTGATCGTCGGCATTATCTTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: PP1S45_97V6.1 (Physcomitrella patens), 3'ss of exon 2
----------------------------------------------------------------------------------------cctcggtgttcatgactac---cctttgtgttgagagcttgaggctactcctaag------ctgcctactttggattacaattctgatatctct--tgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                                                                                         |   | ||||| |   |    | |  |  |||||        |  | |  |  |        |  |  | |||||     |  | |  |      ||     ||| ||||||| ||||| ||||| || ||||| |||||||| |||||||| |||||||||||||| || ||||||||| ||||||| || || || ||||| ||| | 
gtagcggacgaacccttgcaatgtggtgatgtatgggaatacgtagtgaagttggaaagagagatgtaatcgggattgaaatggattcgcagagggttcacggtgatggacatgaggtttgaggatgcagagtgagttgtgggagggtttggtgtgttgtggatgtggttgttaacgtggaggatggcatcgtttgcagGGCGAATGCTCAGCAGCCGAAGCTGTTCGTGGGGATGATCCTGATCCTCATTTTCGCTGAGGCGCTTGCCTTGTATGGACTGATCGTCGGCATTATCTTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: PP1S2_120V6.1 (Physcomitrella patens), 3'ss of exon 2
---------------------------------------------------------------------------cctcggt----gttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                                                                           | ||| |     ||||   ||  | ||||  |    | ||     | | |  |||  | | | |   ||  |   |  | ||    |  | ||  |||  |||| || ||||| ||||| || |||||||||||||| |||||| | || ||||||||||| || || |||||| | || || || ||||||||||||||  | 
gtaataattcaagatctgagcacatctataagaaatgtgtaacacataggttgaatggtgaatcttgtctcttttcttcgattcaaattcagagctgacttttggatcataacct----accattggtaaa-tacatgcacgggggtttgac-cggagggtttatttttttgtgcgcagAGCCAATGCCCAGCAGCCGAAGCTTTTCGTGGGAATGATCTTGATTCTCATTTTCGCTGAGGCTCTTGCCTTATACGGGCTGATTGTGGGCATCATTTTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: EFJ14420 (Selaginella moellendorffii), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactt--tggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                             |  || | ||      ||  ||||   ||  ||  | |||  |     |||| |   |||||  | || ||||||| ||||| |||||||| |||||||| || || ||||||||||| ||||| || || || ||  | || || || |||||||||||||| |||||||| 
-----------------------------gtaagttcga--tcgatcaaaagccatctttttcttcgatatctccattgat-tggtttgtttttctttgcagGGCGAATGCGCAGCAACCCAAGCTTTTTGTTGGAATGATCCTCATTCTCATCTTTGCCGAGGCTTTGGCTCTATACGGTCTCATTGTGGGAATCATCCTG

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: EFJ37480 (Selaginella moellendorffii), 3'ss of exon 2
---cctcggtgttcatga--ctaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
     | |  | ||  ||   |   | |           | ||  |  |   | |  |||  | |||     |     | |   |  |    | | | ||  |||||| || || || || |||||||| ||||||||||||||| | |||||||| ||||| || ||||| || || || ||  | || ||||| ||||| || 
atcatttgaagatcgcgagcttggtcctcacaagatttccctgctggaaactccactctgttttcttc----tctggctttctcactttccatcg-ttttcacagGGCCAACGCTCAACAGCCAAAGCTCTTCGTGGGCATGATCTTGATCCTCATCTTCGCCGAGGCGCTGGCTCTCTACGGATTGATCGTGGGGATCATTCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: EFJ33972 (Selaginella moellendorffii), 3'ss of exon 2
---cctcggtgttcatga--ctaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
     | |  | ||  ||   |   | |           | ||  |  |   | |  |||  | |||     |     | |   |  |    | | | ||  |||||| || || || || |||||||| ||||||||||||||| | |||||||| ||||| || ||||| || || || ||  | || ||||| ||||| || 
atcatttgaagatcgggagcttggtcctcacaagatttccctgctggaaactccactctgttttcttc----tctggctttctcactttccatcg-ttttcacagGGCCAACGCTCAACAGCCAAAGCTCTTCGTGGGCATGATCTTGATCCTCATCTTCGCCGAGGCGCTGGCTCTCTACGGATTGATCGTGGGGATCATTCTT

upper sequence: LOC_Os11g06890.1 (Oryza sativa), 3'ss of exon 2
lower sequence: EFJ26016 (Selaginella moellendorffii), 3'ss of exon 2
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactt--tggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                             |  || | ||      ||  || |   ||  ||  | |||  |     |||| |   |||||  | || ||||||| ||||| |||||||| |||||||| || || |||||||| || ||||| || || || ||  | || || || |||||||||||||| |||||||| 
-----------------------------gtaagttcga--tcgatcaaaaaccatctttttcttcgatatctccattgat-tggtttgtttttctttgcagGGCGAATGCGCAGCAACCCAAGCTTTTTGTTGGAATGATCCTGATTCTCATCTTTGCCGAGGCTTTGGCTCTATACGGTCTCATTGTGGGAATCATCCTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33813315|gb|CF332544.1|CF332544
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCGAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86494012|gb|CI136645.1|CI136645
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88292590|gb|CI502835.1|CI502835
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86485231|gb|CI127864.1|CI127864
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86855396|gb|CI266925.1|CI266925
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88965611|gb|CI011749.1|CI011749
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88976327|gb|CI024544.1|CI024544
EST:     CATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: CATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33691629|gb|CF319868.1|CF319868
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAANGCTTTTCGTGGGCATGATCCTCATCCTCA
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAA-GCTTTTCGTGGGCATGATCCTCATCCTCA
EST: gi|86433713|gb|CI094056.1|CI094056
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86533485|gb|CI173691.1|CI173691
EST:     GTTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88303709|gb|CI510514.1|CI510514
EST:     GGTCTCNCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58604779|gb|CK015307.1|CK015307
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33683765|gb|CF312004.1|CF312004
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86593106|gb|CI255568.1|CI255568
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGCTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88208914|gb|CI206765.1|CI206765
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|13896190|gb|AU182526.1|AU182526
EST:     TGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: TGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88568894|gb|CI499611.1|CI499611
EST:     GTTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88563524|gb|CI494241.1|CI494241
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88285509|gb|CI507379.1|CI507379
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58680896|gb|CK069583.1|CK069583
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGGTGGGCATGATCCTCATCCTCA
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCG-TGGGCATGATCCTCATCCTCA
EST: gi|27577433|gb|CB000128.1|CB000128
EST:     GAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         CTTAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88907455|gb|CI090249.1|CI090249
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88301648|gb|CI503114.1|CI503114
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33660098|gb|CF291065.1|CF291065
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88568404|gb|CI499121.1|CI499121
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88379809|gb|CI504008.1|CI504008
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|89197516|gb|CI010136.1|CI010136
EST:     GGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88464903|gb|CI512208.1|CI512208
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88568779|gb|CI499496.1|CI499496
EST:     GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGT-GATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|89168241|gb|CI109445.1|CI109445
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33663455|gb|CF294422.1|CF294422
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|89198713|gb|CI003450.1|CI003450
EST:     CTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: CTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88199515|gb|CI199365.1|CI199365
EST:     GGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|87018395|gb|CI265687.1|CI265687
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88454786|gb|CI511758.1|CI511758
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33666651|gb|CF297618.1|CF297618
EST:     GTCTCGCTGCCGGAATGGCCATCGGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GTCTCGCTGCCGGAATGGCCATC-GGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88438757|gb|CI546239.1|CI546239
EST:     GGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|117235893|gb|CT847845.1|CT847845
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88464109|gb|CI509593.1|CI509593
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58592116|gb|CF990424.1|CF990424
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33660880|gb|CF291847.1|CF291847
EST:     GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCCTGGTGTCAG                         GGCAAATGCACAGCAACCCAAAGCTTTTCGTGGGCATGATCCTCATCCTCA
genomic: GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGC-TGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACC-AAAGCTTTTCGTGGGCATGATCCTCATCCTCA
EST: gi|33799279|gb|CF325496.1|CF325496
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58691831|gb|CK080518.1|CK080518
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88568639|gb|CI499356.1|CI499356
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58593832|gb|CF992140.1|CF992140
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|25807415|gb|CA763376.1|CA763376
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86509764|gb|CI152397.1|CI152397
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33794860|gb|CF323310.1|CF323310
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88562642|gb|CI493359.1|CI493359
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86422274|gb|CI059847.1|CI059847
EST:     GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88200071|gb|CI199921.1|CI199921
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33665751|gb|CF296718.1|CF296718
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCA
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCA
EST: gi|58588668|gb|CF986976.1|CF986976
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33813317|gb|CF332545.1|CF332545
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCGAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88242082|gb|CI241931.1|CI241931
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88435571|gb|CI506671.1|CI506671
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33660881|gb|CF291848.1|CF291848
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88563776|gb|CI494493.1|CI494493
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|84117177|gb|CD150944.1|CD150944
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88237675|gb|CI237524.1|CI237524
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33689427|gb|CF317666.1|CF317666
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88568896|gb|CI499613.1|CI499613
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33691630|gb|CF319869.1|CF319869
EST:     GTCTCGCTGCCGGAATGGCCATCGGCATTCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GTCTCGCTGCCGGAATGGCCATCGGCA-TCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33666650|gb|CF297617.1|CF297617
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88318800|gb|CI508396.1|CI508396
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|38473214|gb|CF957346.1|CF957346
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         TGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88285107|gb|CI502444.1|CI502444
EST:     GTTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33666037|gb|CF297004.1|CF297004
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|218483455|gb|FG953855.1|FG953855
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GCCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|27577694|gb|CB000389.1|CB000389
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33684207|gb|CF312446.1|CF312446
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88374051|gb|CI510869.1|CI510869
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58586510|gb|CF984818.1|CF984818
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86531625|gb|CI171831.1|CI171831
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88985560|gb|CI016269.1|CI016269
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33684208|gb|CF312447.1|CF312447
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88200955|gb|CI201310.1|CI201310
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|8335571|gb|BE040454.1|BE040454
EST:     NGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|3762105|gb|C99353.1|C99353
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|13896189|gb|AU182525.1|AU182525
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGC
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGC
EST: gi|4716702|gb|AU057818.1|AU057818
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86854976|gb|CI261044.1|CI261044
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88435435|gb|CI509106.1|CI509106
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88435375|gb|CI509046.1|CI509046
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86824158|gb|CI260780.1|CI260780
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCCAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88224664|gb|CI224513.1|CI224513
EST:     GATGCTGGTGTCAG                         GGCAAAATGCACAGCAAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTC
genomic: GATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGC-AAATGCACAGC-AACCAAAGCTTTTCGTGGGCATGATCCTCATCCTC
EST: gi|33690159|gb|CF318398.1|CF318398
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86868491|gb|CI343063.1|CI343063
EST:     CTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: CTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88958279|gb|CI095798.1|CI095798
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33659707|gb|CF282320.1|CF282320
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86861294|gb|CI328080.1|CI328080
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|11442713|gb|BF430616.1|BF430616
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88565828|gb|CI496545.1|CI496545
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33685050|gb|CF313289.1|CF313289
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|218486097|gb|FG952692.1|FG952692
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAAGCTTAACGTGGGCATGATCCTCATCCTCA
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAA-GCTTTTCGTGGGCATGATCCTCATCCTCA
EST: gi|33665752|gb|CF296719.1|CF296719
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88285609|gb|CI509869.1|CI509869
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86834156|gb|CI340295.1|CI340295
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58694993|gb|CK083680.1|CK083680
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88566150|gb|CI496867.1|CI496867
EST:     GTGTCTCTGCCGGAATGCCCATCGGCATGGTCGGTGATGCGTGGTGTCAG                         GGCAAATGCACACCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCA
genomic: GTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGC-TGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCA
EST: gi|86595812|gb|CI266711.1|CI266711
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86528790|gb|CI168996.1|CI168996
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|58594786|gb|CF993094.1|CF993094
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GNCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|4716701|gb|AU057817.1|AU057817
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAN                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|86544704|gb|CI184910.1|CI184910
EST:     GATCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|27576866|gb|CA999560.1|CA999560
EST:     CCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: CCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88566187|gb|CI496904.1|CI496904
EST:     GTTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|87022979|gb|CI279996.1|CI279996
EST:     GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|33666038|gb|CF297005.1|CF297005
EST:     GTCGGTGATGCTGGTGTCAG                         GGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
genomic: GTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCAT
EST: gi|88962828|gb|CI023928.1|CI023928
EST:     GCATCGTCGGTGATGCTGGTGTCAG                         GGCAAAGTGCAGCAGCGACCGAAGCTTTTCGTGGGCATGATCCTCATCGTC
genomic: GCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAA-TGCA-CAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 59 (upstream exon), 75 (downstream exon)
Score: 24

TCTTTGACGGCTACGCGCATCTGTCGTCCGGGCTCGCCTGTGGCCTCGCCGGTCTCGCTGCCGGAATGGCCATCGGCATCGTCGGTGATGCTGGTGTCAGgtaaagatgc ... gtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC
                           ttctgat  putative branch site (score: 24)
                    attacaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
cctcggtgttcatgactaccctttgtgttgagagcttgaggctactcctaagctgcctactttggattacaattctgatatctcttgttggtgttggcagGGCAAATGCACAGCAACCAAAGCTTTTCGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCCCTGTATGGTCTCATTGTGGGCATCATCCTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - -gttcatg
- - - - - - - - - - - -tgtgttg
- - - - - - - - - - - - - - - -gagcttg
- - - - - - - - - - - - - - - - - - - -ggctact
- - - - - - - - - - - - - - - - - - - - - - - - - agctgcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttctgat