1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtattacgacttgcatgctccttgcccaagttcttgtcatcatttccaagagcaaaaccatcttgttggctttaatactgatgcagtaactatggtgtcaaattctgtgaccagATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTT
species | Oryza sativa |
transcript | LOC_Os09g37710.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGCCCAAGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAA ATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCAEST: gi|88395960|gb|CI593162.1|CI593162
genomic: TGCCCAAGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAAgtattacgac ... ctgtgaccagATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCA
EST: TGCCCAAGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAA ATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCA
genomic: TGCCCAAGATGTGCAGCGAGCTTTACTTCTTGATTCCGAACAGGAGAGAAgtattacgac ... ctgtgaccagATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCA
atcttgttggctttaatactgatgcagtaactatggtgtcaaattctgtgaccagATTCTGAAGGAAACCTTACCTGCATGGAAGAGGGAGACCCCCAGCCCAGCATCTCCTTGGCACGCACTCCGTCGGAAGGCGCGGCGGCGGCAGTCGACTT
cagtaac putative branch site (score: 6)
tttaatact TA-rich tract